Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HLA-CQ95604 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
HLA-CQ95604 RNU6-290P-201ENST00000365212 101 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 RNU6-395P-201ENST00000365662 106 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 AL033519.2-201ENST00000403958 392 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-CQ95604 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AC090804.1-201ENST00000448870 490 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 AC087588.1-201ENST00000462203 316 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 APOOP4-201ENST00000513530 597 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 RNU6-1315P-201ENST00000517187 99 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 AF186190.1-201ENST00000517470 480 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
HLA-CQ95604 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-CQ95604 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AC097372.5-201ENST00000623665 376 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HLA-CQ95604 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-CQ95604 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-CQ95604 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HLA-CQ95604 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HLA-CQ95604 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HLA-CQ95604 MIR192-201ENST00000384915 110 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 RNA5SP339-201ENST00000390987 122 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 DUTP5-201ENST00000406790 469 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 RNA5SP487-201ENST00000410186 122 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-CQ95604 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-CQ95604 AC087650.1-201ENST00000431445 468 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 MTCO1P5-201ENST00000433573 344 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 RANP8-201ENST00000444720 713 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-CQ95604 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.93□□□□□ -1.46
HLA-CQ95604 RPS27AP3-201ENST00000453803 454 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AL356981.1-201ENST00000454879 684 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 ACA64.4-201ENST00000459070 127 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-CQ95604 RNU1-86P-201ENST00000516108 154 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 RNU1-107P-201ENST00000516617 154 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 RNU6-143P-201ENST00000516942 93 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AC025755.1-201ENST00000521306 278 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AP006245.1-201ENST00000522549 120 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AC022790.1-201ENST00000522872 204 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-CQ95604 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-CQ95604 MIR4716-201ENST00000579628 84 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AC107294.1-201ENST00000609524 467 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 AP005432.1-201ENST00000580891 3485 ntBASIC5.93□□□□□ -1.46
HLA-CQ95604 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HLA-CQ95604 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-CQ95604 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-CQ95604 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-CQ95604 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-CQ95604 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-CQ95604 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 THAP12P9-201ENST00000503971 2360 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HLA-CQ95604 Y_RNA.143-201ENST00000363520 106 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 RNU6-1020P-201ENST00000363684 107 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 RNA5SP30-201ENST00000365552 115 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 RNU6-76P-201ENST00000384060 104 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-CQ95604 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-CQ95604 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-CQ95604 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-CQ95604 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-CQ95604 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-CQ95604 AC007389.2-201ENST00000434630 306 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-CQ95604 TPT1P12-201ENST00000448968 492 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms