Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC068880.4-201ENST00000623082 495 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AP003072.4-201ENST00000624580 310 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC006020.1-201ENST00000420179 1854 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 Y_RNA.796-201ENST00000364268 102 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 Y_RNA.799-201ENST00000364992 102 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 Y_RNA.338-201ENST00000365320 114 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 MIR620-201ENST00000385232 95 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 PRELID3BP11-201ENST00000414230 479 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AC234782.4-201ENST00000417646 1048 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AL449283.1-202ENST00000418249 604 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 RPS7P5-201ENST00000441482 581 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 GXYLT1P1-201ENST00000446657 490 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AC092436.1-201ENST00000506450 503 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AC008494.2-201ENST00000514544 370 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AP003467.2-201ENST00000520175 319 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 RPL23AP78-201ENST00000599928 470 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AL583856.2-201ENST00000606298 543 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AL391834.2-201ENST00000609982 546 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 uc_338.9-201ENST00000617424 182 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 AC009269.6-201ENST00000621778 588 ntBASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SHROOM3Q8TF72 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SNORD116-12-201ENST00000384468 92 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 RNU6-906P-201ENST00000384700 70 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 DNAJC19P6-201ENST00000401853 280 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 RPL7P10-201ENST00000417407 739 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC244505.3-201ENST00000454598 187 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 MTATP6P14-201ENST00000455189 673 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 TRBV1-201ENST00000476502 284 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 MTND5P4-201ENST00000514978 288 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC104115.2-201ENST00000523026 687 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SMARCE1P4-201ENST00000523647 241 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC011458.1-201ENST00000604034 617 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AP000787.2-201ENST00000604432 568 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL451074.6-201ENST00000608512 729 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 STMN1P1-201ENST00000617809 440 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL109659.3-201ENST00000624985 950 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL121594.5-201ENST00000631724 573 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC138649.5-201ENST00000637456 137 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 MTND4P31-201ENST00000425607 1343 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 MTCO1P6-201ENST00000481192 1384 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL118496.1-201ENST00000440201 1812 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SNORD21-201ENST00000383953 95 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 RNU1-73P-201ENST00000383971 164 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 Y_RNA.472-201ENST00000384322 102 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SNORD65C-201ENST00000390962 71 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 MTCO2P31-201ENST00000402702 684 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 RNU2-42P-201ENST00000410697 113 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 SPA17P1-201ENST00000416656 452 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC096638.1-201ENST00000444678 216 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC072039.1-201ENST00000477611 581 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 MTCYBP20-201ENST00000524239 1129 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC010200.2-201ENST00000605098 235 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC144521.1-201ENST00000607148 956 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC116447.1-201ENST00000613153 453 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL356118.1-201ENST00000635272 1078 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 AL445984.1-201ENST00000637834 659 ntBASIC2.32□□□□□ -2.04
SHROOM3Q8TF72 FAM35CP-201ENST00000554755 2470 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 RNU6-1339P-201ENST00000363574 91 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 RNU6-1293P-201ENST00000384077 107 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AL139156.1-201ENST00000412785 841 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 PTP4A1P7-201ENST00000423476 514 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 Z98742.2-201ENST00000431564 187 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 NANOGP2-201ENST00000435391 727 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC011816.1-201ENST00000441346 546 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms