Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL356583.2-201ENST00000426536 280 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AP000907.1-201ENST00000428428 510 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL353691.1-201ENST00000451332 387 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 CYCSP35-201ENST00000451978 304 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 SNORD42A-201ENST00000459584 64 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 OR5B10P-201ENST00000532869 642 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 EEF1B2P4-201ENST00000551398 348 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC006960.3-201ENST00000561845 705 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC078795.2-201ENST00000602835 1252 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC138749.5-201ENST00000611461 208 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC006329.2-201ENST00000611491 394 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC116165.2-201ENST00000616705 206 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 MIR7975-201ENST00000619350 68 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL590240.3-201ENST00000621416 943 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC119674.1-207ENST00000641355 633 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 TEX21P-201ENST00000447107 1476 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 Y_RNA.359-201ENST00000365498 102 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 HMGN1P14-201ENST00000412459 517 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 EI24P1-201ENST00000416584 867 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 CKS1BP5-201ENST00000434172 273 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AL031667.1-201ENST00000440222 725 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 RPL7P52-201ENST00000449200 742 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 CFTRP1-201ENST00000456646 183 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 HMGB1P25-201ENST00000468402 607 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AL049830.2-201ENST00000480072 201 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 COX7A2P2-201ENST00000505291 250 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 RNU6-714P-201ENST00000516963 103 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AP003033.1-201ENST00000527244 415 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC022878.1-201ENST00000530684 149 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 MIR3200-201ENST00000580767 85 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC087683.1-201ENST00000591187 441 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC079089.3-201ENST00000603094 673 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AL136363.2-201ENST00000604173 851 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC091965.4-201ENST00000607691 587 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC013562.2-201ENST00000611632 603 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC244205.2-202ENST00000635781 342 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AC010733.2-201ENST00000589496 5702 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 AF127577.6-201ENST00000623352 2191 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS52Q8N1B4 MTND5P1-201ENST00000445440 1375 ntBASIC4.02□□□□□ -1.77
VPS52Q8N1B4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms