Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 PCNPP3-201ENST00000393579 471 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 SYF2P2-201ENST00000417620 583 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 RNU7-138P-201ENST00000459479 64 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC008481.1-201ENST00000463278 396 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 RPL30P11-201ENST00000495304 339 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC098976.1-201ENST00000513014 541 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC092490.3-201ENST00000545370 572 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC040958.1-201ENST00000561102 201 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AL390123.1-201ENST00000603216 237 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AL159153.1-201ENST00000619688 317 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC110801.1-201ENST00000623590 212 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC127459.3-201ENST00000624328 466 ntBASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SH3RF1Q7Z6J0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC026951.1-201ENST00000559530 2459 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RNU6-338P-201ENST00000383888 105 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RNU6-701P-201ENST00000384059 107 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 SNORD51-201ENST00000384320 80 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RNU11-4P-201ENST00000391149 133 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 MRPS21P2-201ENST00000424704 264 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC093655.2-201ENST00000425735 631 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 MTCO3P29-201ENST00000432119 779 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RPS3AP46-201ENST00000448352 682 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC234775.1-201ENST00000454247 670 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC091180.1-201ENST00000462104 372 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC008897.1-201ENST00000494006 347 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC004980.4-201ENST00000513375 203 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RNU6-27P-201ENST00000516146 107 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RNU6-897P-201ENST00000517135 105 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC069113.1-201ENST00000517763 267 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC009643.1-201ENST00000532030 391 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC068446.3-201ENST00000555285 382 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 RN7SL356P-201ENST00000582228 248 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC093227.2-201ENST00000589357 285 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 AC174048.1-201ENST00000603389 144 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SH3RF1Q7Z6J0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 AL034549.2-201ENST00000618285 3373 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 Y_RNA.81-201ENST00000362997 102 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 RNVU1-6-201ENST00000364688 164 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 OR1L6-202ENST00000373684 1044 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 U3.29-201ENST00000391296 212 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 RPL19P16-201ENST00000433839 588 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 REG1CP-206ENST00000447469 496 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 RNU7-169P-201ENST00000459456 61 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 RPL31P60-201ENST00000478450 367 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 AC090151.1-201ENST00000520784 730 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 MIR4273-201ENST00000582824 84 ntBASIC6.04□□□□□ -1.44
SH3RF1Q7Z6J0 AP000346.3-201ENST00000622821 210 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms