Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC010342.1-201ENST00000514047 877 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC093677.1-201ENST00000514414 678 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 RN7SKP13-201ENST00000515933 244 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 Y_RNA.672-201ENST00000516289 104 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-528P-201ENST00000516926 100 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 DEFB109D-201ENST00000529497 240 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC107016.1-201ENST00000550463 337 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 DUXAP4-201ENST00000603046 613 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC012314.7-201ENST00000619693 93 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC004009.2-201ENST00000623016 728 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AC099654.14-201ENST00000638599 341 ntBASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.6□□□□□ -1.67
UBE3BQ7Z3V4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 GNG5P1-201ENST00000255500 204 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 MIR7-3-201ENST00000384898 110 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 FGF7P8-201ENST00000402994 292 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL590002.1-201ENST00000406554 418 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 NUP35P2-201ENST00000416748 943 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 USP9YP36-201ENST00000424581 829 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL358934.1-201ENST00000432346 324 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL451074.3-201ENST00000437709 472 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC105402.2-201ENST00000438503 358 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC005297.2-201ENST00000450430 606 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL359385.1-201ENST00000456509 365 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL136126.1-201ENST00000473603 402 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC114967.1-201ENST00000504890 259 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 ARL4AP2-201ENST00000507378 601 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 TXNP6-201ENST00000510190 310 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 VWA8P1-201ENST00000510889 176 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC074344.1-201ENST00000512823 224 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC022790.1-201ENST00000522872 204 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 OR5AQ1P-201ENST00000527596 927 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 CENPUP2-201ENST00000555897 1186 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC245014.2-201ENST00000603689 287 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC246785.4-201ENST00000605374 287 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL390208.1-201ENST00000605885 644 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 U3.45-201ENST00000607547 219 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-87P-201ENST00000607561 108 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC009318.4-201ENST00000620496 486 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AL357559.1-201ENST00000622228 274 ntBASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3BQ7Z3V4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
UBE3BQ7Z3V4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
UBE3BQ7Z3V4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.59□□□□□ -1.68
UBE3BQ7Z3V4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
UBE3BQ7Z3V4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 CR848007.1-201ENST00000442354 1699 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL161781.1-201ENST00000354277 403 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-730P-201ENST00000383954 104 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 CCNG1P1-201ENST00000406783 885 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 RNU4-55P-201ENST00000410731 137 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL353777.1-201ENST00000425552 326 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 MTCO2P19-201ENST00000427513 598 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC112653.1-201ENST00000443851 386 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 RBM43P1-201ENST00000476891 1081 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC009646.1-201ENST00000510455 318 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 SNORA70.18-201ENST00000516696 98 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-714P-201ENST00000516963 103 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms