Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AL355812.1-201ENST00000603215 216 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AL133216.2-202ENST00000634512 349 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AL359922.3-201ENST00000624779 1670 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 CPHL1P-201ENST00000461341 3407 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AL445487.1-201ENST00000415694 1580 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC121333.1-201ENST00000567488 2709 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 RNU1-83P-201ENST00000363426 164 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.145-201ENST00000363527 102 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 RNA5SP283-201ENST00000365604 119 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 SNORD51-201ENST00000384320 80 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 SNORA75.4-201ENST00000391278 119 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 U3.29-201ENST00000391296 212 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AL136372.1-201ENST00000403060 228 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 PPIAP31-201ENST00000405422 495 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AL031584.1-201ENST00000447169 754 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 RNU7-152P-201ENST00000458982 64 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 RNU6-1208P-201ENST00000459588 107 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC012181.1-201ENST00000479895 423 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 SNORA67.7-201ENST00000516664 135 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.718-201ENST00000517110 102 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC103843.2-201ENST00000530523 682 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AL627309.6-201ENST00000606857 840 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 uc_338.13-201ENST00000618243 179 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AC007546.1-201ENST00000619452 559 ntBASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.67□□□□□ -1.5
USPL1Q5W0Q7 AL158163.1-201ENST00000603915 1649 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 RNU6-82P-201ENST00000363970 107 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 RNU6-1078P-201ENST00000364522 103 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 RNU6-178P-201ENST00000384631 104 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AL592114.1-201ENST00000403842 483 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 RPL5P18-201ENST00000406671 891 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 RNU6-628P-201ENST00000410675 107 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AC068533.1-201ENST00000418542 415 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 SNORD97-201ENST00000459187 142 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.654-201ENST00000497848 106 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 HMGB3P15-201ENST00000507326 574 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AC023632.4-201ENST00000517783 191 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 OR5B10P-201ENST00000532869 642 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 uc_338.34-201ENST00000617467 174 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 MTND5P42-201ENST00000637720 498 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms