Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC080078.3-201ENST00000605407 463 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC005296.1-201ENST00000616145 209 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 MIR203B-201ENST00000636080 86 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 HMGB1P27-201ENST00000431429 603 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 MIR4285-201ENST00000581001 85 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC083899.3-201ENST00000603413 594 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AL133216.2-202ENST00000634512 349 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC109464.2-201ENST00000510242 943 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AL731537.2-201ENST00000561565 951 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 OR1S1-201ENST00000624470 978 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 OR51B8P-201ENST00000449892 769 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 MTCO3P30-201ENST00000426425 670 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 BX322784.1-201ENST00000455793 1077 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 MIR514B-201ENST00000516774 80 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC068944.2-201ENST00000610373 403 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AL096701.2-201ENST00000416920 238 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 HMGB1P12-201ENST00000438594 598 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC092451.1-201ENST00000480211 153 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC090751.1-201ENST00000566966 267 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 MIR4419B-201ENST00000577260 68 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 AC048347.1-201ENST00000624621 427 ntBASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VPS13DQ5THJ4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AC109780.2-201ENST00000413467 845 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 RPL23AP20-201ENST00000447965 421 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 RN7SKP234-201ENST00000517173 224 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 WARS2P1-201ENST00000429678 537 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 TOMM22P6-201ENST00000465035 409 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 NAMPTP2-201ENST00000505629 1115 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AP002748.2-201ENST00000528671 348 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AP004242.1-201ENST00000533701 349 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AL049838.1-201ENST00000563647 981 ntBASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS13DQ5THJ4 AL023807.1-201ENST00000407932 359 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC092832.1-201ENST00000422934 400 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 HMGB1P47-201ENST00000511281 589 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 RN7SL622P-201ENST00000585292 275 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 RNA5SP27-201ENST00000363839 119 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 MYL12BP1-201ENST00000569826 507 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 MIR5694-201ENST00000581190 76 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 RNU6-461P-201ENST00000364195 107 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AIG1P1-201ENST00000503376 148 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms