Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC013404.1-201ENST00000413068 249 ntBASIC2.28□□□□□ -2.04
NUP188Q5SRE5 AP000873.1-201ENST00000463987 400 ntBASIC2.28□□□□□ -2.04
NUP188Q5SRE5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NUP188Q5SRE5 RN7SKP34-201ENST00000516142 244 ntBASIC2.28□□□□□ -2.04
NUP188Q5SRE5 PTP4A1P6-201ENST00000531034 478 ntBASIC2.28□□□□□ -2.04
NUP188Q5SRE5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.28□□□□□ -2.04
NUP188Q5SRE5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.28□□□□□ -2.04
NUP188Q5SRE5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP188Q5SRE5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUP188Q5SRE5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
NUP188Q5SRE5 RNA5SP167-201ENST00000365461 116 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.28□□□□□ -2.05
NUP188Q5SRE5 RPL19P1-201ENST00000411635 428 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 POLHP1-201ENST00000411806 470 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AL109741.2-201ENST00000455561 343 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 HMGB3P30-201ENST00000457863 606 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 SNORD116-26-201ENST00000516006 96 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AC135279.1-201ENST00000543493 504 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AC124283.4-201ENST00000581815 456 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AL049779.4-201ENST00000604500 156 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AL121917.1-203ENST00000605534 577 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AL590099.1-201ENST00000615276 138 ntBASIC2.28□□□□□ -2.05
NUP188Q5SRE5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.28□□□□□ -2.05
NUP188Q5SRE5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.28□□□□□ -2.05
NUP188Q5SRE5 AC093536.2-201ENST00000565257 1406 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 CR382285.2-201ENST00000624662 1495 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 UBE2L2-201ENST00000254302 429 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 HMGB1P12-201ENST00000438594 598 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 HMGB3P21-201ENST00000452483 547 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 MIR502-201ENST00000606349 86 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 RMST_6.1-201ENST00000611980 203 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 OR4G1P-203ENST00000641984 1631 ntBASIC2.27□□□□□ -2.05
NUP188Q5SRE5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NUP188Q5SRE5 RNU6-356P-201ENST00000384140 107 ntBASIC2.26□□□□□ -2.05
NUP188Q5SRE5 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
NUP188Q5SRE5 AC107393.1-201ENST00000512403 346 ntBASIC2.26□□□□□ -2.05
NUP188Q5SRE5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP188Q5SRE5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NUP188Q5SRE5 AC104307.1-201ENST00000616142 196 ntBASIC2.26□□□□□ -2.05
NUP188Q5SRE5 MIR6515-201ENST00000619843 57 ntBASIC2.26□□□□□ -2.05
NUP188Q5SRE5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP188Q5SRE5 RNY1-201ENST00000364228 113 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 SNORD114-22-201ENST00000365423 72 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 SSXP1-201ENST00000453640 473 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 ARL4AP2-201ENST00000507378 601 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 MIR6734-201ENST00000621166 68 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 MTCO1P6-201ENST00000481192 1384 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 MIR96-201ENST00000362288 78 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 Y_RNA.374-201ENST00000365606 101 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 TOMM22P1-201ENST00000418578 312 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 MTND2P16-201ENST00000419987 799 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 ARPC3P1-201ENST00000437218 533 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC012181.1-201ENST00000479895 423 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC090071.1-201ENST00000507713 644 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 RNA5SP220-201ENST00000516298 104 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AL049838.1-201ENST00000563647 981 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AC067838.1-201ENST00000606064 577 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 AL121594.5-201ENST00000631724 573 ntBASIC2.25□□□□□ -2.05
NUP188Q5SRE5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.24□□□□□ -2.05
NUP188Q5SRE5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUP188Q5SRE5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NUP188Q5SRE5 MTND4LP13-201ENST00000425022 298 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP188Q5SRE5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.24□□□□□ -2.05
NUP188Q5SRE5 AC107398.1-201ENST00000486904 505 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 AC090453.1-201ENST00000495560 436 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 ATP5EP1-201ENST00000510257 156 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 AC008015.1-201ENST00000555505 465 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 MIR4421-201ENST00000578133 69 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 MIR4446-201ENST00000578505 67 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 AC006270.2-201ENST00000578523 652 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 AC008687.2-201ENST00000597865 520 ntBASIC2.24□□□□□ -2.05
NUP188Q5SRE5 RNU6-1-201ENST00000383898 107 ntBASIC2.23□□□□□ -2.05
NUP188Q5SRE5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.23□□□□□ -2.05
NUP188Q5SRE5 RNU6-42P-201ENST00000384165 107 ntBASIC2.23□□□□□ -2.05
NUP188Q5SRE5 RNU6-36P-201ENST00000384172 107 ntBASIC2.23□□□□□ -2.05
NUP188Q5SRE5 RNU6-4P-201ENST00000384205 107 ntBASIC2.23□□□□□ -2.05
NUP188Q5SRE5 RNU6-5P-201ENST00000384238 107 ntBASIC2.23□□□□□ -2.05
NUP188Q5SRE5 RNU6-3P-201ENST00000384314 107 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms