Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-371P-201ENST00000364283 108 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.358-201ENST00000365491 99 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SNORD78.2-201ENST00000391076 69 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.623-201ENST00000411128 95 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SNORD2.1-201ENST00000458762 69 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SNORD116-25-201ENST00000516517 92 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-677P-201ENST00000516914 101 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC021678.3-201ENST00000517893 476 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 IGKV2-18-201ENST00000522607 343 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AP005660.1-201ENST00000522972 293 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC023824.2-201ENST00000566185 400 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 MIR1273E-201ENST00000581165 102 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SNORD113-5-201ENST00000607261 78 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC006329.2-201ENST00000611491 394 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC243654.2-201ENST00000612843 443 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.802-201ENST00000614892 130 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AL031601.2-202ENST00000622650 282 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC068769.1-201ENST00000474767 2426 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 AC010332.2-201ENST00000613083 1904 ntBASIC5.25□□□□□ -1.57
RNFT1Q5M7Z0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AL353796.1-201ENST00000561542 3241 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 UBE2WP1-201ENST00000362030 340 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.308-201ENST00000365043 101 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-637P-201ENST00000384050 107 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 PTGES3P4-201ENST00000426243 356 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 RAB28P5-201ENST00000427490 651 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 TBCAP1-201ENST00000436520 327 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AP000936.3-201ENST00000438127 255 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AC022431.1-201ENST00000450941 438 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 RPS11P1-201ENST00000451072 473 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AL137159.1-201ENST00000452808 512 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 NUTF2P7-201ENST00000453086 375 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 RPL21P41-201ENST00000459863 264 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 RN7SL184P-201ENST00000488308 297 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AC093815.1-201ENST00000508637 280 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 RNY3P16-201ENST00000516338 101 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AC027308.1-201ENST00000517993 110 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AL590705.4-201ENST00000532209 134 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 MIR4504-201ENST00000577413 92 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 MIR3684-201ENST00000579779 74 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 MIR5692A1-201ENST00000580523 69 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 AL591135.1-201ENST00000401578 5914 ntBASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RNFT1Q5M7Z0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC092070.2-203ENST00000598377 3644 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms