Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC109927.2-201ENST00000506416 303 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 SAP18P1-201ENST00000512058 390 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC017037.2-201ENST00000513850 890 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC103783.1-201ENST00000520506 373 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC025627.2-201ENST00000576220 160 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC006254.3-201ENST00000603353 884 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RBM11P1-201ENST00000604951 799 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AL365503.1-201ENST00000605247 905 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AL390240.1-201ENST00000612950 384 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC108479.2-201ENST00000617314 601 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 MTND5P26-201ENST00000426018 1752 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 MIR23B-201ENST00000384832 97 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 Y_RNA.582-201ENST00000391023 95 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AMD1P2-201ENST00000412936 992 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 RPL7P36-201ENST00000444633 681 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 SSXP4-201ENST00000451349 245 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 RN7SL542P-201ENST00000467147 294 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 RPS27AP1-201ENST00000475545 471 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 RN7SL271P-201ENST00000487601 295 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 RN7SL604P-201ENST00000492589 296 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AL358832.1-201ENST00000497800 389 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 NDUFB4P2-201ENST00000509515 391 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 FTH1P21-201ENST00000512179 511 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC136619.2-201ENST00000563361 631 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC006130.2-201ENST00000586202 326 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC126118.1-201ENST00000607744 628 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC109347.2-201ENST00000610220 349 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AC091834.1-201ENST00000614543 472 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AL355810.1-201ENST00000614629 552 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AL139089.1-201ENST00000620372 975 ntBASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LONRF3Q496Y0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.53□□□□□ -1.69
LONRF3Q496Y0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AL645937.1-201ENST00000641739 1652 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AP002001.2-201ENST00000529025 1469 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 RNU6-853P-201ENST00000364306 107 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 RNU5A-6P-201ENST00000384136 116 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 MIR135A2-201ENST00000384854 100 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 RNU2-43P-201ENST00000410306 190 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 Y_RNA.608-201ENST00000410647 95 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 MTCO1P17-201ENST00000411522 491 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 NEK4P1-201ENST00000433383 879 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 SKP1P1-201ENST00000438081 489 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 DNAJC19P4-201ENST00000440115 345 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AP000542.1-201ENST00000448473 371 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC093392.2-201ENST00000450682 337 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 RPS23P3-201ENST00000470993 430 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC007537.2-201ENST00000472093 511 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 VN1R105P-201ENST00000486595 910 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AC137800.2-201ENST00000574375 120 ntBASIC4.52□□□□□ -1.69
LONRF3Q496Y0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.52□□□□□ -1.69
LONRF3Q496Y0 MIR3913-1-201ENST00000577744 102 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms