Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4□□□□□ -1.77
CCDC96Q2M329 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC96Q2M329 AL353748.2-201ENST00000622148 471 ntBASIC4□□□□□ -1.77
CCDC96Q2M329 AC004009.2-201ENST00000623016 728 ntBASIC4□□□□□ -1.77
CCDC96Q2M329 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4□□□□□ -1.77
CCDC96Q2M329 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC097714.1-201ENST00000511272 1647 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC96Q2M329 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC96Q2M329 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 RNU6-1200P-201ENST00000384162 107 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL136372.1-201ENST00000403060 228 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL450338.1-201ENST00000407987 512 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 MTATP6P27-201ENST00000416987 621 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC127526.1-201ENST00000417526 366 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL353705.1-201ENST00000433468 480 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL354941.1-201ENST00000438600 464 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC093392.2-201ENST00000450682 337 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 RPS15AP17-201ENST00000470598 390 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 RPL32P34-201ENST00000486380 400 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 LINC00888-204ENST00000487386 421 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC092185.1-201ENST00000491371 97 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC093663.1-201ENST00000497190 394 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC111000.2-201ENST00000507775 550 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 FCF1P8-201ENST00000510322 597 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 RNU6-232P-201ENST00000517144 64 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 HSPA8P13-201ENST00000523715 472 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC026333.2-201ENST00000542164 106 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC135279.1-201ENST00000543493 504 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 MED28P6-201ENST00000558776 231 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC006557.5-201ENST00000603126 811 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AL161756.2-201ENST00000604597 246 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC012443.1-201ENST00000605605 231 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC004223.4-201ENST00000612426 332 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC009090.3-201ENST00000616553 565 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC120349.2-201ENST00000625002 298 ntBASIC3.99□□□□□ -1.77
CCDC96Q2M329 AC068647.1-201ENST00000489539 2265 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC96Q2M329 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 SNRPEP3-201ENST00000338402 276 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC96Q2M329 RNU6-553P-201ENST00000364047 96 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 TAF9BP1-201ENST00000396646 746 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 HSPE1P1-201ENST00000421494 318 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 BEND7P1-201ENST00000422058 457 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 RPL27AP8-201ENST00000424277 446 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 UBE2D3P2-201ENST00000424409 445 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 RPL7P46-201ENST00000425129 740 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 MTND2P20-201ENST00000440805 661 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 BX510359.1-201ENST00000456973 237 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 RNU7-125P-201ENST00000458760 62 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC004801.2-202ENST00000463559 283 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 MTND1P16-201ENST00000465177 898 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC114981.1-201ENST00000503897 678 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 RPF2P2-201ENST00000504693 896 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 MIR4276-201ENST00000584832 70 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC067852.3-201ENST00000589177 561 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AL031985.2-201ENST00000600955 480 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC004987.4-201ENST00000603383 338 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC106900.2-201ENST00000604994 317 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC018714.1-201ENST00000605028 208 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 TUG1_1.1-201ENST00000610654 145 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 AC068137.4-201ENST00000638485 296 ntBASIC3.98□□□□□ -1.77
CCDC96Q2M329 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC96Q2M329 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC96Q2M329 AL513185.3-201ENST00000433335 1300 ntBASIC3.97□□□□□ -1.77
CCDC96Q2M329 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC96Q2M329 AC032011.1-201ENST00000611703 1549 ntBASIC3.97□□□□□ -1.77
CCDC96Q2M329 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC96Q2M329 RNU6-1122P-201ENST00000384449 107 ntBASIC3.97□□□□□ -1.77
CCDC96Q2M329 PIGPP2-201ENST00000411569 458 ntBASIC3.97□□□□□ -1.77
CCDC96Q2M329 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms