Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.18□□□□□ -1.58
SOX4Q06945 AL356981.1-201ENST00000454879 684 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 RPL36AP13-201ENST00000457490 317 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 RN7SL517P-201ENST00000462240 305 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 DYNLL1P5-201ENST00000467158 270 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 RN7SL354P-201ENST00000469282 294 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 RPL22P13-201ENST00000493291 347 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX4Q06945 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX4Q06945 RNY3P15-201ENST00000516297 97 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 FTH1P11-201ENST00000517577 551 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 IGKV1-32-201ENST00000519290 311 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 AC022882.1-201ENST00000532142 501 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX4Q06945 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX4Q06945 MIR3941-201ENST00000582572 103 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 MIR4293-201ENST00000584305 78 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 MIR5692C1-201ENST00000585309 91 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX4Q06945 AC092447.9-201ENST00000603395 144 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 AC138627.2-201ENST00000624202 601 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX4Q06945 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX4Q06945 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX4Q06945 TLK1P1-201ENST00000456760 2440 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX4Q06945 AC092079.1-201ENST00000558620 1985 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX4Q06945 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.18□□□□□ -1.58
SOX4Q06945 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX4Q06945 AC103710.2-202ENST00000641454 2853 ntBASIC5.18□□□□□ -1.58
SOX4Q06945 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 SMG1P6-201ENST00000532337 2930 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 MTCO1P24-201ENST00000515438 1558 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SOX4Q06945 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX4Q06945 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX4Q06945 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 RNU6-450P-201ENST00000364654 107 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SOX4Q06945 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SOX4Q06945 RPS16P5-201ENST00000406501 404 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AL583834.1-201ENST00000406943 343 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 RNU6-101P-201ENST00000410323 104 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 EIF4EP1-201ENST00000422311 642 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AL590632.1-201ENST00000424289 371 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC093106.2-201ENST00000428212 385 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 HIGD1AP11-201ENST00000438361 280 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC005094.1-201ENST00000440420 368 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 MTCO3P45-201ENST00000443036 613 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX4Q06945 AC010326.1-201ENST00000462726 602 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC103987.1-201ENST00000473394 348 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AP002812.1-201ENST00000495378 474 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 RBBP4P6-201ENST00000508098 202 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC021146.3-201ENST00000511911 260 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC092470.1-201ENST00000546187 132 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC090115.3-201ENST00000553218 849 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX4Q06945 AL121576.1-201ENST00000556055 276 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC105129.1-201ENST00000560250 297 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC209154.1-201ENST00000582156 337 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 AC068790.4-201ENST00000602474 263 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AL022394.1-201ENST00000606979 292 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 AC138965.3-201ENST00000623875 498 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX4Q06945 MAPK10-328ENST00000641553 4009 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SOX4Q06945 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SOX4Q06945 SAMMSON-213ENST00000641336 1521 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX4Q06945 AC091812.1-201ENST00000432235 1948 ntBASIC5.17□□□□□ -1.58
SOX4Q06945 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SOX4Q06945 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX4Q06945 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SOX4Q06945 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SOX4Q06945 AC027228.2-201ENST00000567141 2154 ntBASIC5.16□□□□□ -1.58
SOX4Q06945 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.16□□□□□ -1.58
SOX4Q06945 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX4Q06945 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SOX4Q06945 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 RNU6-1078P-201ENST00000364522 103 ntBASIC5.16□□□□□ -1.58
SOX4Q06945 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX4Q06945 RNU6-128P-201ENST00000383976 107 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms