Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 MTND2P19-201ENST00000449129 1012 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 TRBV26-201ENST00000456572 344 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC008885.2-201ENST00000509506 930 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC026436.1-201ENST00000510537 270 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 RNA5SP148-201ENST00000516527 94 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 ATP5F1P5-201ENST00000526403 760 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 CYCSP26-201ENST00000534107 320 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC011260.1-201ENST00000578420 472 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC002487.1-201ENST00000604565 994 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 SNORD14A-201ENST00000606526 91 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC098657.3-201ENST00000620434 263 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AP000553.5-201ENST00000641933 54 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 MIR518C-201ENST00000384822 101 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 U3.20-201ENST00000390909 217 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 U3.26-201ENST00000391236 204 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 RNU4-74P-201ENST00000411280 161 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 NPM1P11-201ENST00000417106 855 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 RPL27AP8-201ENST00000424277 446 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC098614.2-201ENST00000426040 255 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 MTCO1P39-201ENST00000426148 480 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC097499.1-201ENST00000444277 208 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC005002.1-201ENST00000447458 540 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 WASF1P1-201ENST00000447560 1131 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 RPS15AP27-201ENST00000449183 343 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AL109933.2-201ENST00000452651 260 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 PNPLA4P1-201ENST00000458328 305 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 RPL36AP51-201ENST00000487216 318 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC025459.1-201ENST00000504072 156 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC090888.1-201ENST00000561335 1141 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 EIF5A2P1-201ENST00000564027 460 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC090312.2-201ENST00000582687 378 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AL121917.1-203ENST00000605534 577 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC107214.2-201ENST00000608204 634 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AP003485.2-201ENST00000623636 610 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 MIR1291-201ENST00000627649 87 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 CENPCP1-201ENST00000533085 2578 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 TPTE2P4-201ENST00000258589 1605 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 AC097714.1-201ENST00000511272 1647 ntBASIC1.76□□□□□ -2.13
HIST1H1AQ02539 MTCO1P6-201ENST00000481192 1384 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC016716.1-201ENST00000265882 708 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 HSPE1P11-201ENST00000339579 310 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 OR56A5-201ENST00000340110 738 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 RNA5SP68-201ENST00000363885 119 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 MIR17-201ENST00000385012 84 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 SNORA46.1-201ENST00000391069 153 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 NANOGP5-201ENST00000424456 877 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 PSPHP1-201ENST00000450062 261 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC104435.1-201ENST00000483483 166 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC234781.5-201ENST00000508429 271 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 RPL7P20-201ENST00000520308 745 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC234778.2-201ENST00000566241 354 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 AC135507.1-201ENST00000607214 561 ntBASIC1.75□□□□□ -2.13
HIST1H1AQ02539 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
HIST1H1AQ02539 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 RNU6-173P-201ENST00000364215 104 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms