Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MTATP6P2-201ENST00000603319 678 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH6P55285 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH6P55285 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH6P55285 AL137790.1-201ENST00000634283 177 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH6P55285 AC006927.2-201ENST00000639256 389 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC009812.4-201ENST00000569134 1805 ntBASIC2.81□□□□□ -1.96
CDH6P55285 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
CDH6P55285 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CDH6P55285 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH6P55285 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH6P55285 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH6P55285 AC087359.1-201ENST00000508335 1740 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CDH6P55285 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDH6P55285 AC109315.1-201ENST00000584143 1347 ntBASIC2.8□□□□□ -1.96
CDH6P55285 DEFB108F-201ENST00000344638 222 ntBASIC2.8□□□□□ -1.96
CDH6P55285 RNU6-236P-201ENST00000363886 106 ntBASIC2.8□□□□□ -1.96
CDH6P55285 FO393413.1-201ENST00000402892 195 ntBASIC2.8□□□□□ -1.96
CDH6P55285 RPL7P27-201ENST00000403775 720 ntBASIC2.8□□□□□ -1.96
CDH6P55285 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
CDH6P55285 LUZP4P1-201ENST00000415420 344 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH6P55285 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH6P55285 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH6P55285 DPRXP1-201ENST00000426312 460 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH6P55285 AC017099.1-201ENST00000448261 1028 ntBASIC2.8□□□□□ -1.96
CDH6P55285 SUMO2P2-201ENST00000456482 255 ntBASIC2.8□□□□□ -1.96
CDH6P55285 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH6P55285 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.8□□□□□ -1.96
CDH6P55285 AC006445.2-201ENST00000510061 472 ntBASIC2.8□□□□□ -1.96
CDH6P55285 DEFB108D-201ENST00000527787 222 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AC079600.2-201ENST00000550076 130 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH6P55285 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH6P55285 AL158211.2-201ENST00000607282 395 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AC002064.3-201ENST00000623448 346 ntBASIC2.8□□□□□ -1.96
CDH6P55285 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
CDH6P55285 AC008568.2-201ENST00000623862 2313 ntBASIC2.8□□□□□ -1.96
CDH6P55285 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH6P55285 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH6P55285 Z99496.1-201ENST00000469424 1477 ntBASIC2.79□□□□□ -1.96
CDH6P55285 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDH6P55285 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.79□□□□□ -1.96
CDH6P55285 RNA5SP139-201ENST00000364340 117 ntBASIC2.79□□□□□ -1.96
CDH6P55285 RNU2-43P-201ENST00000410306 190 ntBASIC2.79□□□□□ -1.96
CDH6P55285 Z92545.1-201ENST00000411782 234 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC019178.2-201ENST00000423595 505 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH6P55285 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH6P55285 AC024082.2-201ENST00000434771 238 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC105272.1-201ENST00000438604 198 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH6P55285 RPL9P33-201ENST00000484311 566 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH6P55285 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH6P55285 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH6P55285 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AL359273.1-201ENST00000510918 627 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH6P55285 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH6P55285 RNU6-1261P-201ENST00000517194 104 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AP003355.1-201ENST00000518956 587 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH6P55285 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH6P55285 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH6P55285 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH6P55285 OR7K1P-201ENST00000546439 926 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH6P55285 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH6P55285 MIR3921-201ENST00000577308 85 ntBASIC2.79□□□□□ -1.96
CDH6P55285 MIR3609-201ENST00000582661 80 ntBASIC2.79□□□□□ -1.96
CDH6P55285 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AL583856.2-201ENST00000606298 543 ntBASIC2.79□□□□□ -1.96
CDH6P55285 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH6P55285 AP000254.1-201ENST00000609934 520 ntBASIC2.79□□□□□ -1.96
CDH6P55285 TUG1_1.1-201ENST00000610654 145 ntBASIC2.79□□□□□ -1.96
CDH6P55285 AC027309.3-201ENST00000623419 351 ntBASIC2.79□□□□□ -1.96
CDH6P55285 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH6P55285 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDH6P55285 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH6P55285 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDH6P55285 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
CDH6P55285 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH6P55285 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH6P55285 AL672167.1-206ENST00000356293 943 ntBASIC2.78□□□□□ -1.96
CDH6P55285 Y_RNA.25-201ENST00000362528 102 ntBASIC2.78□□□□□ -1.96
CDH6P55285 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
CDH6P55285 RNU5B-4P-201ENST00000363508 111 ntBASIC2.78□□□□□ -1.96
CDH6P55285 RNU6-7-201ENST00000364784 107 ntBASIC2.78□□□□□ -1.96
CDH6P55285 RNU6-8-201ENST00000365467 107 ntBASIC2.78□□□□□ -1.96
CDH6P55285 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDH6P55285 MIR135A2-201ENST00000384854 100 ntBASIC2.78□□□□□ -1.96
CDH6P55285 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
CDH6P55285 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDH6P55285 MIR1290-201ENST00000408735 78 ntBASIC2.78□□□□□ -1.96
CDH6P55285 BX682237.1-201ENST00000415016 335 ntBASIC2.78□□□□□ -1.96
CDH6P55285 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms