Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.19□□□□□ -1.74
NEK3P51956 AC099489.2-201ENST00000574976 260 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC022146.1-201ENST00000595307 847 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC091304.9-201ENST00000612091 226 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC103858.2-201ENST00000621471 543 ntBASIC4.19□□□□□ -1.74
NEK3P51956 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.19□□□□□ -1.74
NEK3P51956 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NEK3P51956 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEK3P51956 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEK3P51956 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NEK3P51956 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEK3P51956 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NEK3P51956 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NEK3P51956 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.18□□□□□ -1.74
NEK3P51956 Y_RNA.126-201ENST00000363382 111 ntBASIC4.18□□□□□ -1.74
NEK3P51956 RNU4-24P-201ENST00000364565 139 ntBASIC4.18□□□□□ -1.74
NEK3P51956 RNY3P13-201ENST00000365542 102 ntBASIC4.18□□□□□ -1.74
NEK3P51956 MIR514A1-201ENST00000385133 98 ntBASIC4.18□□□□□ -1.74
NEK3P51956 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 BTF3L4P1-201ENST00000413813 468 ntBASIC4.18□□□□□ -1.74
NEK3P51956 CDK8P2-201ENST00000415020 547 ntBASIC4.18□□□□□ -1.74
NEK3P51956 CYP4F29P-201ENST00000420685 446 ntBASIC4.18□□□□□ -1.74
NEK3P51956 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEK3P51956 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.18□□□□□ -1.74
NEK3P51956 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.18□□□□□ -1.74
NEK3P51956 AC119618.1-201ENST00000434191 222 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AL353706.1-201ENST00000436728 494 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AP000936.2-201ENST00000447151 681 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AL162151.2-201ENST00000448875 158 ntBASIC4.18□□□□□ -1.74
NEK3P51956 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.18□□□□□ -1.74
NEK3P51956 RPS23P3-201ENST00000470993 430 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 MTCO3P7-201ENST00000510008 774 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.18□□□□□ -1.74
NEK3P51956 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.18□□□□□ -1.74
NEK3P51956 AC006362.1-201ENST00000567392 174 ntBASIC4.18□□□□□ -1.74
NEK3P51956 ZNF415P1-201ENST00000582279 1166 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AC090578.1-201ENST00000604955 591 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AL391813.2-201ENST00000609113 322 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.18□□□□□ -1.74
NEK3P51956 AC010678.1-201ENST00000614118 713 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AC010133.1-201ENST00000615809 842 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AC009509.4-201ENST00000619202 509 ntBASIC4.18□□□□□ -1.74
NEK3P51956 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.18□□□□□ -1.74
NEK3P51956 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
NEK3P51956 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEK3P51956 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEK3P51956 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.18□□□□□ -1.74
NEK3P51956 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEK3P51956 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEK3P51956 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 Z82217.1-201ENST00000625157 8149 ntBASIC4.17□□□□□ -1.74
NEK3P51956 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 AP001148.1-201ENST00000624124 2359 ntBASIC4.17□□□□□ -1.74
NEK3P51956 MIR372-201ENST00000362225 67 ntBASIC4.17□□□□□ -1.74
NEK3P51956 U3.11-201ENST00000364476 212 ntBASIC4.17□□□□□ -1.74
NEK3P51956 RNU1-89P-201ENST00000384592 164 ntBASIC4.17□□□□□ -1.74
NEK3P51956 RPL7P60-201ENST00000397636 735 ntBASIC4.17□□□□□ -1.74
NEK3P51956 RPL21P65-201ENST00000406094 466 ntBASIC4.17□□□□□ -1.74
NEK3P51956 RN7SKP53-201ENST00000411337 315 ntBASIC4.17□□□□□ -1.74
NEK3P51956 YPEL5P1-201ENST00000419731 367 ntBASIC4.17□□□□□ -1.74
NEK3P51956 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.17□□□□□ -1.74
NEK3P51956 AL117339.2-201ENST00000430475 180 ntBASIC4.17□□□□□ -1.74
NEK3P51956 AC073614.1-201ENST00000438690 650 ntBASIC4.17□□□□□ -1.74
NEK3P51956 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.17□□□□□ -1.74
NEK3P51956 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.17□□□□□ -1.74
NEK3P51956 USP9YP15-201ENST00000442391 422 ntBASIC4.17□□□□□ -1.74
NEK3P51956 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.17□□□□□ -1.74
NEK3P51956 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.17□□□□□ -1.74
NEK3P51956 MTND2P24-201ENST00000453434 806 ntBASIC4.17□□□□□ -1.74
NEK3P51956 CFTRP1-201ENST00000456646 183 ntBASIC4.17□□□□□ -1.74
NEK3P51956 SNORD97-201ENST00000459187 142 ntBASIC4.17□□□□□ -1.74
NEK3P51956 RPL38P1-201ENST00000460914 211 ntBASIC4.17□□□□□ -1.74
NEK3P51956 PPIAP15-201ENST00000479662 484 ntBASIC4.17□□□□□ -1.74
NEK3P51956 AC068305.1-201ENST00000497406 726 ntBASIC4.17□□□□□ -1.74
NEK3P51956 HMGB3P15-201ENST00000507326 574 ntBASIC4.17□□□□□ -1.74
NEK3P51956 RNU2-10P-201ENST00000516375 211 ntBASIC4.17□□□□□ -1.74
NEK3P51956 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.17□□□□□ -1.74
NEK3P51956 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.17□□□□□ -1.74
NEK3P51956 AP003181.2-201ENST00000528941 181 ntBASIC4.17□□□□□ -1.74
NEK3P51956 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.17□□□□□ -1.74
NEK3P51956 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.74
NEK3P51956 AC137800.2-201ENST00000574375 120 ntBASIC4.17□□□□□ -1.74
NEK3P51956 MIR4293-201ENST00000584305 78 ntBASIC4.17□□□□□ -1.74
NEK3P51956 AC040904.1-201ENST00000590850 223 ntBASIC4.17□□□□□ -1.74
NEK3P51956 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.17□□□□□ -1.74
NEK3P51956 AC100793.4-201ENST00000613683 429 ntBASIC4.17□□□□□ -1.74
NEK3P51956 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.17□□□□□ -1.74
NEK3P51956 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 ZNF807-201ENST00000328088 1707 ntBASIC4.17□□□□□ -1.74
NEK3P51956 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms