Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLCN1P35523 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLCN1P35523 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLCN1P35523 AC139769.1-204ENST00000472297 1931 ntBASIC6.35□□□□□ -1.39
CLCN1P35523 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CLCN1P35523 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN1P35523 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 MIR628-201ENST00000385229 95 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 MIR1275-201ENST00000408770 80 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN1P35523 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.34□□□□□ -1.39
CLCN1P35523 MTCO3P19-201ENST00000415864 321 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 AC139712.2-201ENST00000424302 339 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 UBE2D3P2-201ENST00000424409 445 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 PIGPP3-201ENST00000425307 415 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.34□□□□□ -1.39
CLCN1P35523 RN7SL170P-201ENST00000487098 295 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 AC105384.2-201ENST00000508433 640 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 RNU6-789P-201ENST00000517105 102 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 RN7SKP92-201ENST00000517266 244 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.34□□□□□ -1.39
CLCN1P35523 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.34□□□□□ -1.39
CLCN1P35523 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.34□□□□□ -1.39
CLCN1P35523 MIR3976-201ENST00000606807 139 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 MIR6809-201ENST00000612189 116 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.34□□□□□ -1.39
CLCN1P35523 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CLCN1P35523 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CLCN1P35523 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CLCN1P35523 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN1P35523 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
CLCN1P35523 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN1P35523 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
CLCN1P35523 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CLCN1P35523 AC027228.2-201ENST00000567141 2154 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN1P35523 SAR1AP2-201ENST00000392696 594 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AL109941.1-201ENST00000401925 229 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 RNU6-712P-201ENST00000410558 100 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 RNU6-607P-201ENST00000411283 108 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC063979.1-201ENST00000415539 377 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 RPL7AP49-201ENST00000429522 581 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AL591438.1-201ENST00000433508 581 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN1P35523 CEACAMP6-201ENST00000452007 574 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AL591473.1-201ENST00000464297 313 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC009120.1-201ENST00000493458 473 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN1P35523 AC008489.1-201ENST00000524271 483 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN1P35523 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN1P35523 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN1P35523 AC012433.1-201ENST00000588916 398 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC012254.3-201ENST00000591183 2117 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC092266.1-201ENST00000610958 165 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 MIR6806-201ENST00000622141 64 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 AC073593.1-201ENST00000624500 411 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN1P35523 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN1P35523 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN1P35523 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN1P35523 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN1P35523 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CLCN1P35523 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN1P35523 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN1P35523 AC068870.1-201ENST00000563737 2455 ntBASIC6.33□□□□□ -1.4
CLCN1P35523 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN1P35523 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLCN1P35523 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CLCN1P35523 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CLCN1P35523 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLCN1P35523 SELENOWP1-201ENST00000322792 252 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 RNU6-212P-201ENST00000362642 104 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 RNU6-249P-201ENST00000363016 102 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 RNU6-1249P-201ENST00000363237 111 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 Y_RNA.471-201ENST00000384312 102 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 SNORA48.4-201ENST00000391089 134 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 RPL7AP73-201ENST00000413490 353 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 RAC1P3-201ENST00000416129 580 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.32□□□□□ -1.4
CLCN1P35523 RPS4XP5-201ENST00000419038 768 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 AC104333.2-201ENST00000422630 192 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.32□□□□□ -1.4
CLCN1P35523 AC092423.1-201ENST00000430165 186 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 AP000281.1-201ENST00000444036 316 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 EIF4A1P11-201ENST00000451239 222 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 HMGN2P13-201ENST00000476476 274 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 AC007686.1-201ENST00000488511 463 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 AC110792.1-201ENST00000491826 472 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 GMPSP1-201ENST00000514075 579 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 RN7SKP234-201ENST00000517173 224 ntBASIC6.32□□□□□ -1.4
CLCN1P35523 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.32□□□□□ -1.4
CLCN1P35523 AC084121.1-201ENST00000533882 835 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms