Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 TMEM167AP1-201ENST00000423409 219 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 RPL7L1P10-201ENST00000427790 463 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC091862.1-201ENST00000438016 1100 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 RPL26P6-201ENST00000440913 438 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC097262.1-201ENST00000452559 548 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 OR6K1P-201ENST00000456766 971 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXD13P35453 AC004801.2-202ENST00000463559 283 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 RPS27AP1-201ENST00000475545 471 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXD13P35453 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD13P35453 AC022690.1-201ENST00000526681 550 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC013828.2-201ENST00000532487 235 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC007954.1-201ENST00000554198 494 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 RPL23AP84-201ENST00000571193 464 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 MIR4474-201ENST00000579189 78 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 NIFKP6-201ENST00000598115 845 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC068831.7-201ENST00000616954 363 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 PLCE1P1-201ENST00000622094 305 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC099063.3-201ENST00000642066 185 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC010733.2-201ENST00000589496 5702 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD13P35453 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD13P35453 AL355596.1-201ENST00000565399 3996 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
HOXD13P35453 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD13P35453 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXD13P35453 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD13P35453 RNU6-432P-201ENST00000384196 109 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 Y_RNA.548-201ENST00000384656 105 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 MIR184-201ENST00000384962 84 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 MIR493-201ENST00000385254 89 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 MIR591-201ENST00000385290 95 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 RNU6-55P-201ENST00000411092 107 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 RNU6-954P-201ENST00000411355 107 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 BX323014.1-201ENST00000412876 237 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXD13P35453 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXD13P35453 PPP1R11P2-201ENST00000423543 382 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 UBE2D3P2-201ENST00000424409 445 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AL590383.1-201ENST00000428602 75 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXD13P35453 AL159987.2-201ENST00000432754 307 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 RSU1P2-202ENST00000437884 485 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 RPL17P49-201ENST00000443728 411 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXD13P35453 PDSS1P2-201ENST00000449397 678 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AL049714.1-201ENST00000466686 347 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD13P35453 AC112198.1-201ENST00000505369 1220 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 HSPE1P23-201ENST00000509838 286 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXD13P35453 LTV1P1-201ENST00000510683 1237 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXD13P35453 AC060771.1-201ENST00000582031 164 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 MIR544B-201ENST00000582372 78 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AP001004.1-201ENST00000582468 324 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 VN1R90P-201ENST00000595717 726 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC008751.2-201ENST00000597885 980 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXD13P35453 XIST_intron.1-201ENST00000619444 68 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC091304.6-201ENST00000619761 202 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXD13P35453 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXD13P35453 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD13P35453 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD13P35453 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD13P35453 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXD13P35453 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXD13P35453 CR383658.2-201ENST00000547576 1525 ntBASIC3.7□□□□□ -1.82
HOXD13P35453 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD13P35453 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HOXD13P35453 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
HOXD13P35453 RNU1-70P-201ENST00000362618 164 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HOXD13P35453 MIR183-201ENST00000384958 110 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 RNU6-754P-201ENST00000391166 107 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC109780.2-201ENST00000413467 845 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD13P35453 BX842559.1-201ENST00000419615 532 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC069157.1-201ENST00000421749 137 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD13P35453 RPL23AP82-202ENST00000427528 469 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD13P35453 ATP5C1P1-201ENST00000441945 895 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD13P35453 FAM103A2P-201ENST00000444122 354 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXD13P35453 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD13P35453 AC010401.1-201ENST00000463867 348 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 CENPBD1P1-201ENST00000464061 469 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 HSPE1P6-201ENST00000479457 291 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AP002812.1-201ENST00000495378 474 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXD13P35453 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD13P35453 GMPSP1-201ENST00000514075 579 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD13P35453 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms