Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTND5P7-201ENST00000413558 1798 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL4A5P29400 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.16□□□□□ -2.06
COL4A5P29400 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A5P29400 USP9YP15-201ENST00000442391 422 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A5P29400 AC092451.1-201ENST00000480211 153 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 AC090453.1-201ENST00000495560 436 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 RNU6-491P-201ENST00000516099 110 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 IGHV3-76-201ENST00000522465 295 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 OR4P1P-201ENST00000530808 1136 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 OR5D17P-201ENST00000531492 978 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.16□□□□□ -2.06
COL4A5P29400 AC012360.2-201ENST00000609349 391 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A5P29400 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A5P29400 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL4A5P29400 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A5P29400 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
COL4A5P29400 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL4A5P29400 AF127577.6-201ENST00000623352 2191 ntBASIC2.16□□□□□ -2.06
COL4A5P29400 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
COL4A5P29400 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL4A5P29400 SNORD114-26-201ENST00000363543 72 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 RNU6-244P-201ENST00000391028 104 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.15□□□□□ -2.06
COL4A5P29400 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.15□□□□□ -2.06
COL4A5P29400 RPL39P40-201ENST00000445481 146 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.15□□□□□ -2.06
COL4A5P29400 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.15□□□□□ -2.06
COL4A5P29400 AL021397.1-201ENST00000451806 248 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.15□□□□□ -2.06
COL4A5P29400 RNA5SP402-201ENST00000517148 110 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 CBX3P4-201ENST00000538909 354 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 ARL2BPP2-201ENST00000550907 489 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 AL645939.4-201ENST00000604495 135 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.15□□□□□ -2.06
COL4A5P29400 AC135803.1-201ENST00000608748 565 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 MIR6504-201ENST00000613520 61 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 LINC00216-201ENST00000623548 1126 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 AC119674.1-220ENST00000641502 1048 ntBASIC2.15□□□□□ -2.06
COL4A5P29400 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.15□□□□□ -2.06
COL4A5P29400 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
COL4A5P29400 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
COL4A5P29400 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.15□□□□□ -2.07
COL4A5P29400 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL4A5P29400 RNU2-37P-201ENST00000410695 177 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 RNU2-68P-201ENST00000410878 191 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 AF274854.1-201ENST00000413236 615 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 AL096701.2-201ENST00000416920 238 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL4A5P29400 AC104332.2-201ENST00000429959 156 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A5P29400 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A5P29400 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A5P29400 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.15□□□□□ -2.07
COL4A5P29400 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL4A5P29400 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL4A5P29400 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A5P29400 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.15□□□□□ -2.07
COL4A5P29400 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.15□□□□□ -2.07
COL4A5P29400 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.15□□□□□ -2.07
COL4A5P29400 AC007687.1-201ENST00000602704 304 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 AP003117.1-201ENST00000602771 554 ntBASIC2.15□□□□□ -2.07
COL4A5P29400 AP001148.1-201ENST00000624124 2359 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL4A5P29400 HMGB1P13-201ENST00000406019 642 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.14□□□□□ -2.07
COL4A5P29400 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A5P29400 AL121594.1-201ENST00000475906 575 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 GTF2IP9-201ENST00000502460 301 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A5P29400 AL354943.1-201ENST00000572103 781 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 WISP1-OT1-201ENST00000602893 642 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AC069304.3-201ENST00000603938 1084 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AL035411.2-201ENST00000604022 421 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 BX248123.2-201ENST00000606318 124 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AC005156.1-201ENST00000613371 573 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AL512283.1-201ENST00000606756 1384 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 AL157700.1-201ENST00000561973 1432 ntBASIC2.14□□□□□ -2.07
COL4A5P29400 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A5P29400 RNU1-57P-201ENST00000384491 166 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 MTND4P13-201ENST00000402078 1023 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.13□□□□□ -2.07
COL4A5P29400 AL138799.3-201ENST00000438968 350 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL4A5P29400 HMGB1P26-201ENST00000452520 628 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 SSXP1-201ENST00000453640 473 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AC008571.1-201ENST00000467232 300 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.13□□□□□ -2.07
COL4A5P29400 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL4A5P29400 RAC1P5-201ENST00000512182 576 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AC107393.1-201ENST00000512403 346 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.13□□□□□ -2.07
COL4A5P29400 AP001180.3-201ENST00000582221 145 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.13□□□□□ -2.07
COL4A5P29400 AC011468.4-201ENST00000603942 409 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms