Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.44□□□□□ -1.86
ERCC2P18074 ERHP1-201ENST00000523006 310 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.44□□□□□ -1.86
ERCC2P18074 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.44□□□□□ -1.86
ERCC2P18074 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.44□□□□□ -1.86
ERCC2P18074 MIR4429-201ENST00000580105 73 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 MIR4444-1-201ENST00000581696 74 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.44□□□□□ -1.86
ERCC2P18074 MIR4444-2-201ENST00000584390 74 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 AC008962.1-201ENST00000605729 304 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 AC087683.2-201ENST00000611384 326 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.44□□□□□ -1.86
ERCC2P18074 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
ERCC2P18074 AC005832.2-201ENST00000538921 1430 ntBASIC3.44□□□□□ -1.86
ERCC2P18074 AC012321.1-201ENST00000561622 1588 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC2P18074 RNU5E-8P-201ENST00000363502 116 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 RNU1-33P-201ENST00000364249 162 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 Y_RNA.302-201ENST00000364997 102 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC2P18074 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC2P18074 PPP1R11P2-201ENST00000423543 382 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.43□□□□□ -1.86
ERCC2P18074 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC2P18074 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 BX679664.1-201ENST00000434429 253 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 UBE2V1P13-201ENST00000436983 439 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 TXNP1-201ENST00000441872 371 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AL359385.1-201ENST00000456509 365 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC004801.2-202ENST00000463559 283 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 RPL21P13-201ENST00000488305 481 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC034222.1-201ENST00000494052 532 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC106872.3-201ENST00000495104 446 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC2P18074 POU5F1P7-201ENST00000508759 541 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC2P18074 AL359273.1-201ENST00000510918 627 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC087276.1-201ENST00000529659 480 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC2P18074 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.43□□□□□ -1.86
ERCC2P18074 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.43□□□□□ -1.86
ERCC2P18074 MIR4474-201ENST00000579189 78 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC015917.1-201ENST00000579654 510 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC2P18074 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.43□□□□□ -1.86
ERCC2P18074 ZNF415P1-201ENST00000582279 1166 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.43□□□□□ -1.86
ERCC2P18074 BNIP3P23-201ENST00000599655 511 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC018714.1-201ENST00000605028 208 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC009570.1-201ENST00000609599 745 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC063944.3-201ENST00000609969 533 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AC009159.2-201ENST00000617603 606 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AL031667.3-201ENST00000620124 655 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 PCMTD1P7-201ENST00000634506 357 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.43□□□□□ -1.86
ERCC2P18074 AC090740.1-201ENST00000623193 2262 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
ERCC2P18074 MTCO1P12-201ENST00000414273 1543 ntBASIC3.43□□□□□ -1.86
ERCC2P18074 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC2P18074 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
ERCC2P18074 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ERCC2P18074 RPL7P26-201ENST00000333817 754 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 Y_RNA.18-201ENST00000362461 102 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 RNU1-70P-201ENST00000362618 164 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 RNU5A-1-201ENST00000362698 116 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 RNU6-637P-201ENST00000384050 107 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 MIR183-201ENST00000384958 110 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 MIR591-201ENST00000385290 95 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 U3.20-201ENST00000390909 217 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 RN7SKP285-201ENST00000410137 318 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC2P18074 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 RPL27AP8-201ENST00000424277 446 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 VN1R34P-201ENST00000447387 883 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC2P18074 MTND1P9-201ENST00000453775 944 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 RPL21P10-201ENST00000463521 490 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 AC022447.3-201ENST00000506865 495 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC2P18074 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC2P18074 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.42□□□□□ -1.86
ERCC2P18074 AC013828.2-201ENST00000532487 235 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AC009094.1-201ENST00000564443 426 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC2P18074 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC2P18074 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 ISCA1P3-201ENST00000577104 373 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 MIR3921-201ENST00000577308 85 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 MIR544B-201ENST00000582372 78 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 MIR4276-201ENST00000584832 70 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 UBE2L4-201ENST00000587688 464 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 AP000254.1-201ENST00000609934 520 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AC008121.2-201ENST00000614647 523 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms