Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 AC103710.2-202ENST00000641454 2853 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXD8P13378 Y_RNA.39-201ENST00000362620 98 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 RNU1-115P-201ENST00000365329 160 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 RNU6-209P-201ENST00000384118 107 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 SNORA5.1-201ENST00000384275 131 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 RNU6-393P-201ENST00000384475 107 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 Y_RNA.512-201ENST00000384518 102 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 GLULP6-201ENST00000399502 913 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 EIF4EP1-201ENST00000422311 642 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXD8P13378 MRPS18BP2-201ENST00000434310 759 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXD8P13378 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXD8P13378 RPS24P6-201ENST00000452670 400 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC234775.1-201ENST00000454247 670 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC103987.1-201ENST00000473394 348 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC026801.1-201ENST00000497178 464 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 SNORA14.1-201ENST00000516113 141 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 Y_RNA.668-201ENST00000516233 93 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AP000859.1-201ENST00000525536 307 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 DEFB108D-201ENST00000527787 222 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC090115.3-201ENST00000553218 849 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXD8P13378 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXD8P13378 AL365434.2-201ENST00000607979 234 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXD8P13378 MIR6853-201ENST00000619642 74 ntBASIC5.45□□□□□ -1.54
HOXD8P13378 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HOXD8P13378 AC091812.1-201ENST00000432235 1948 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXD8P13378 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HOXD8P13378 AC008758.3-201ENST00000507003 1829 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HOXD8P13378 RNU6-946P-201ENST00000383878 107 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 RNU6-637P-201ENST00000384050 107 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 RNA5SP332-201ENST00000391063 115 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 RNU11-4P-201ENST00000391149 133 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 RNU6-1109P-201ENST00000391187 107 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 RNU6-293P-201ENST00000411259 106 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXD8P13378 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXD8P13378 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXD8P13378 RPL23AP69-201ENST00000431134 458 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXD8P13378 RNU7-167P-201ENST00000459160 62 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXD8P13378 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXD8P13378 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXD8P13378 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXD8P13378 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXD8P13378 RPL23AP84-201ENST00000571193 464 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AC022726.1-201ENST00000587475 207 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXD8P13378 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AL161637.1-201ENST00000622380 412 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 AC091925.2-201ENST00000625059 256 ntBASIC5.44□□□□□ -1.54
HOXD8P13378 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXD8P13378 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXD8P13378 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
HOXD8P13378 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXD8P13378 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXD8P13378 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HOXD8P13378 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXD8P13378 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXD8P13378 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXD8P13378 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXD8P13378 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXD8P13378 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXD8P13378 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXD8P13378 SNORA73.1-201ENST00000363107 205 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 Y_RNA.288-201ENST00000364854 92 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 RNU6-434P-201ENST00000384376 107 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXD8P13378 RN7SKP16-201ENST00000410180 299 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 Z99755.1-201ENST00000414048 380 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXD8P13378 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXD8P13378 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXD8P13378 HIGD1AP11-201ENST00000438361 280 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC002553.2-201ENST00000453217 340 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 RN7SL517P-201ENST00000462240 305 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms