Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 Y_RNA.135-201ENST00000363439 95 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 RNU6-1078P-201ENST00000364522 103 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 RNU6-1032P-201ENST00000384100 107 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 Y_RNA.493-201ENST00000384422 102 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 SNORD3H-201ENST00000384486 214 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 MCFD2P1-201ENST00000417812 300 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 TXNP1-201ENST00000441872 371 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 HMGB1P41-201ENST00000520234 440 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AP000857.1-201ENST00000532151 543 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AL133271.1-201ENST00000538229 291 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 SAMMSON-213ENST00000641336 1521 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 ZNF807-201ENST00000328088 1707 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC090971.4-201ENST00000560291 1800 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 U3.12-201ENST00000364498 214 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 SNORA71.2-201ENST00000364941 134 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 Y_RNA.367-201ENST00000365544 101 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RNU4-48P-201ENST00000365559 182 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 DEFB109C-201ENST00000382575 264 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 DEFB109B-201ENST00000382656 264 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 MIR1250-201ENST00000408098 113 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RPL37P10-201ENST00000412884 288 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC074085.1-201ENST00000413598 418 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 OR4K11P-201ENST00000431829 904 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RPS17P13-201ENST00000448974 407 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC079168.2-201ENST00000453977 416 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 CYCSP34-201ENST00000458172 304 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RPL23AP24-201ENST00000458203 385 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 Y_RNA.653-201ENST00000459091 95 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RN7SKP234-201ENST00000517173 224 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 IGLVIV-65-201ENST00000517313 360 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC103843.2-201ENST00000530523 682 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC007224.1-201ENST00000564410 144 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC010653.1-201ENST00000571108 881 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 OR4K8P-201ENST00000578842 1048 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AL670379.11-201ENST00000604059 253 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AL670379.10-201ENST00000604330 253 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AL670379.12-201ENST00000605291 253 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AL670379.9-201ENST00000605428 253 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC022893.3-201ENST00000607665 437 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AP005019.3-201ENST00000620418 560 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC244100.1-202ENST00000621554 382 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AL161637.1-201ENST00000622380 412 ntBASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CSB-PGBD3P0DP91 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 RNA5SP388-201ENST00000362584 119 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 RNU6-989P-201ENST00000362756 107 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 SNORA57.1-201ENST00000391227 145 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 RPS24P13-201ENST00000442520 397 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 snoU109.4-201ENST00000458953 143 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 AC068305.1-201ENST00000497406 726 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 SLC25A15P5-201ENST00000508033 253 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 RN7SKP24-201ENST00000515888 284 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 SNORD27.1-201ENST00000516319 72 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 RNU6-709P-201ENST00000517257 104 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 HMGB1P19-201ENST00000517578 577 ntBASIC6.31□□□□□ -1.4
CSB-PGBD3P0DP91 AC093249.4-201ENST00000564755 259 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms