Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC093422.3-201ENST00000428506 305 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 YWHAZP8-201ENST00000436935 731 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 FABP5P3-201ENST00000437960 408 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC092170.1-201ENST00000440211 356 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A2P08572 CBWD4P-201ENST00000445695 655 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC010265.1-201ENST00000513509 211 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 RNU2-58P-201ENST00000516403 183 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC104115.2-201ENST00000523026 687 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC034268.2-201ENST00000571784 482 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AL157700.1-201ENST00000561973 1432 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC244517.1-201ENST00000606030 2086 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL4A2P08572 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL4A2P08572 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC005005.2-201ENST00000420779 380 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC241520.1-201ENST00000422654 1099 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 AL445669.2-201ENST00000454425 421 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 HMGB3P15-201ENST00000507326 574 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A2P08572 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC010468.3-201ENST00000508225 458 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC104986.1-201ENST00000517978 436 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC124293.1-201ENST00000530034 493 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 OSBPL9P3-201ENST00000534523 595 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A2P08572 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 AC112503.2-201ENST00000609005 552 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC012531.5-201ENST00000611375 151 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 AC011890.2-201ENST00000613393 294 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A2P08572 MIR4278-201ENST00000636094 69 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A2P08572 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A2P08572 RNU6-321P-201ENST00000410912 106 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 HMGN2P21-201ENST00000447764 270 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.04□□□□□ -2.08
COL4A2P08572 AC092451.1-201ENST00000480211 153 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 TRAV31-201ENST00000502780 342 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A2P08572 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A2P08572 MTCO1P30-201ENST00000515244 580 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
COL4A2P08572 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A2P08572 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A2P08572 MIR4255-201ENST00000579351 72 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 AC007687.1-201ENST00000602704 304 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 AL118556.2-201ENST00000614375 824 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 AC104307.1-201ENST00000616142 196 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 RMST_10.1-201ENST00000616309 154 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 AC006065.5-201ENST00000623427 349 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.04□□□□□ -2.08
COL4A2P08572 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.04□□□□□ -2.08
COL4A2P08572 AP005901.5-201ENST00000545779 1796 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.04□□□□□ -2.08
COL4A2P08572 AL353746.1-201ENST00000566293 6881 ntBASIC2.04□□□□□ -2.08
COL4A2P08572 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
COL4A2P08572 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A2P08572 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL4A2P08572 MTND5P11-201ENST00000511037 1812 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC007256.1-201ENST00000392253 2765 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 Y_RNA.118-201ENST00000363300 101 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 RNU6-77P-201ENST00000410554 91 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 UBE2V1P9-201ENST00000414760 368 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 MTCO1P43-201ENST00000431831 488 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 CKS1BP5-201ENST00000434172 273 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.03□□□□□ -2.08
COL4A2P08572 RPL7P54-201ENST00000438336 674 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 SDR42E1P3-201ENST00000438345 502 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 MTCO3P43-201ENST00000440974 771 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 BTBD7P2-201ENST00000441962 620 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A2P08572 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL4A2P08572 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.03□□□□□ -2.08
COL4A2P08572 HMGN3P1-201ENST00000453847 193 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AL109741.2-201ENST00000455561 343 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms