Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU4-78P-201ENST00000410940 126 ntBASIC3.41□□□□□ -1.86
VTNP04004 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.41□□□□□ -1.86
VTNP04004 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.41□□□□□ -1.86
VTNP04004 TOMM22P1-201ENST00000418578 312 ntBASIC3.41□□□□□ -1.86
VTNP04004 AL365338.1-201ENST00000422282 858 ntBASIC3.41□□□□□ -1.86
VTNP04004 GLRXP1-201ENST00000423261 334 ntBASIC3.41□□□□□ -1.86
VTNP04004 AL049610.1-201ENST00000423374 372 ntBASIC3.41□□□□□ -1.86
VTNP04004 TXNL1P1-201ENST00000429528 554 ntBASIC3.41□□□□□ -1.86
VTNP04004 Z83846.1-201ENST00000446798 265 ntBASIC3.41□□□□□ -1.86
VTNP04004 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 AC140076.1-201ENST00000449897 361 ntBASIC3.41□□□□□ -1.86
VTNP04004 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
VTNP04004 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.41□□□□□ -1.86
VTNP04004 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 AC004801.2-202ENST00000463559 283 ntBASIC3.41□□□□□ -1.86
VTNP04004 AC096576.1-201ENST00000489014 359 ntBASIC3.41□□□□□ -1.86
VTNP04004 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.41□□□□□ -1.86
VTNP04004 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.41□□□□□ -1.86
VTNP04004 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 AC022861.1-201ENST00000522981 663 ntBASIC3.41□□□□□ -1.86
VTNP04004 HSPE1P3-201ENST00000559254 309 ntBASIC3.41□□□□□ -1.86
VTNP04004 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 RNU6-88P-201ENST00000606801 100 ntBASIC3.41□□□□□ -1.86
VTNP04004 OR2AS2P-201ENST00000606902 342 ntBASIC3.41□□□□□ -1.86
VTNP04004 AC072039.2-201ENST00000608883 439 ntBASIC3.41□□□□□ -1.86
VTNP04004 AL137790.1-201ENST00000634283 177 ntBASIC3.41□□□□□ -1.86
VTNP04004 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.41□□□□□ -1.86
VTNP04004 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VTNP04004 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VTNP04004 AC095050.2-201ENST00000510748 1458 ntBASIC3.41□□□□□ -1.86
VTNP04004 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VTNP04004 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VTNP04004 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VTNP04004 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VTNP04004 RNU6-289P-201ENST00000364093 107 ntBASIC3.4□□□□□ -1.87
VTNP04004 SNORA7.2-201ENST00000364446 145 ntBASIC3.4□□□□□ -1.87
VTNP04004 RNU6-660P-201ENST00000364566 109 ntBASIC3.4□□□□□ -1.87
VTNP04004 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VTNP04004 RNU6-723P-201ENST00000383973 107 ntBASIC3.4□□□□□ -1.87
VTNP04004 AL031679.1-201ENST00000400616 525 ntBASIC3.4□□□□□ -1.87
VTNP04004 AL583834.1-201ENST00000406943 343 ntBASIC3.4□□□□□ -1.87
VTNP04004 RN7SKP220-201ENST00000410611 288 ntBASIC3.4□□□□□ -1.87
VTNP04004 RNU6-920P-201ENST00000410926 92 ntBASIC3.4□□□□□ -1.87
VTNP04004 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 AC083875.1-201ENST00000419509 405 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.4□□□□□ -1.87
VTNP04004 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 RPL21P112-201ENST00000434403 463 ntBASIC3.4□□□□□ -1.87
VTNP04004 AL590103.1-201ENST00000434488 307 ntBASIC3.4□□□□□ -1.87
VTNP04004 SETP8-201ENST00000435341 628 ntBASIC3.4□□□□□ -1.87
VTNP04004 AL022578.1-201ENST00000439330 1433 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC025750.2-201ENST00000442609 450 ntBASIC3.4□□□□□ -1.87
VTNP04004 RNU7-136P-201ENST00000458819 69 ntBASIC3.4□□□□□ -1.87
VTNP04004 SNORA59A-201ENST00000459326 152 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC090453.1-201ENST00000495560 436 ntBASIC3.4□□□□□ -1.87
VTNP04004 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VTNP04004 AC006499.2-201ENST00000513470 337 ntBASIC3.4□□□□□ -1.87
VTNP04004 RNU2-58P-201ENST00000516403 183 ntBASIC3.4□□□□□ -1.87
VTNP04004 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC024224.1-201ENST00000538284 609 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 OR7K1P-201ENST00000546439 926 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
VTNP04004 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 MIR3915-201ENST00000578518 97 ntBASIC3.4□□□□□ -1.87
VTNP04004 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.4□□□□□ -1.87
VTNP04004 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC024560.3-201ENST00000608482 349 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC073968.1-201ENST00000618594 637 ntBASIC3.4□□□□□ -1.87
VTNP04004 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC008443.7-201ENST00000622195 246 ntBASIC3.4□□□□□ -1.87
VTNP04004 AL356266.1-201ENST00000623311 483 ntBASIC3.4□□□□□ -1.87
VTNP04004 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
VTNP04004 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.4□□□□□ -1.87
VTNP04004 AL513185.3-201ENST00000433335 1300 ntBASIC3.4□□□□□ -1.87
VTNP04004 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.4□□□□□ -1.87
VTNP04004 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
VTNP04004 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VTNP04004 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.39□□□□□ -1.87
VTNP04004 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VTNP04004 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms