Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN1O95832 COX6CP12-201ENST00000446748 202 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AP000936.2-201ENST00000447151 681 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 RPS20P32-201ENST00000456044 356 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN1O95832 AC104563.1-201ENST00000476147 376 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AP000797.1-201ENST00000478870 387 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AC068724.1-201ENST00000487100 792 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN1O95832 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN1O95832 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN1O95832 AC091965.2-201ENST00000512324 613 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN1O95832 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN1O95832 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN1O95832 OR8L1P-201ENST00000534005 955 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CLDN1O95832 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN1O95832 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN1O95832 MIR4307-201ENST00000582802 84 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN1O95832 AC006504.3-201ENST00000586818 523 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN1O95832 AC119751.7-201ENST00000600494 245 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AC068276.1-201ENST00000605793 379 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AC073968.1-201ENST00000618594 637 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AL596245.1-201ENST00000618994 362 ntBASIC3.23□□□□□ -1.89
CLDN1O95832 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN1O95832 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN1O95832 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLDN1O95832 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN1O95832 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN1O95832 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN1O95832 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 RNU4-35P-201ENST00000362588 141 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RNU1-18P-201ENST00000363062 164 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RNU6-289P-201ENST00000364093 107 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 HMGN2P8-201ENST00000391458 268 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 HLFP1-201ENST00000402375 499 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN1O95832 RHEBP3-201ENST00000411920 351 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 RPL37P21-201ENST00000435890 276 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC091862.1-201ENST00000438016 1100 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RPS24P1-201ENST00000438550 371 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 AP000542.1-201ENST00000448473 371 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 PAXBP1P1-201ENST00000449315 447 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 MTCO3P20-201ENST00000454926 688 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RNU6-956P-201ENST00000458868 103 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RPL21P8-201ENST00000465083 535 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC146507.1-201ENST00000468335 354 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC087312.1-201ENST00000471411 480 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 HMGB1P36-201ENST00000487709 576 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 TXNP6-201ENST00000510190 310 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC079140.3-201ENST00000511111 550 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 MTND5P4-201ENST00000514978 288 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 FABP5P5-201ENST00000515537 406 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 AC013828.2-201ENST00000532487 235 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 CENPUP2-201ENST00000555897 1186 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC006116.10-201ENST00000591836 581 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 SNORA62.6-201ENST00000606322 83 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC239868.4-201ENST00000608318 671 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC090425.2-201ENST00000608818 501 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC104010.1-201ENST00000616889 150 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN1O95832 AC098679.4-201ENST00000624241 654 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 AC092447.10-201ENST00000620607 1652 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms