Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 RPL29P29-201ENST00000448725 423 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 SETP11-201ENST00000473027 690 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC008885.2-201ENST00000509506 930 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC022447.1-201ENST00000515358 464 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC005832.3-201ENST00000537929 631 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC044913.1-201ENST00000557200 430 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 HMGB1P6-201ENST00000569046 646 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC002400.1-201ENST00000569310 726 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC078795.2-201ENST00000602835 1252 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AP000811.1-201ENST00000603803 651 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 RBM11P1-201ENST00000604951 799 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC128687.1-201ENST00000605304 619 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC092184.1-201ENST00000625042 715 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CACNA1FO60840 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CACNA1FO60840 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC006366.1-201ENST00000422002 759 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC022018.1-201ENST00000430685 241 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 GAPDHP39-201ENST00000481866 979 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA1FO60840 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC024224.1-201ENST00000538284 609 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC074051.3-201ENST00000570238 358 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA1FO60840 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC079089.3-201ENST00000603094 673 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC010680.3-201ENST00000604215 520 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 AC005046.1-201ENST00000608515 625 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC073114.1-201ENST00000612027 490 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AL020991.1-201ENST00000612314 373 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC005332.10-201ENST00000612725 619 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 AC015540.1-201ENST00000615828 501 ntBASIC3.49□□□□□ -1.85
CACNA1FO60840 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.49□□□□□ -1.85
CACNA1FO60840 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CACNA1FO60840 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
CACNA1FO60840 MTCO1P6-201ENST00000481192 1384 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 MTND4P34-201ENST00000572715 1371 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AP000526.1-201ENST00000603308 1388 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC025263.3-201ENST00000622965 1396 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 RNF6P1-201ENST00000444889 1784 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC027514.1-201ENST00000588561 1603 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA1FO60840 Y_RNA.41-201ENST00000362646 102 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 SNORA26.8-201ENST00000391306 124 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA1FO60840 ARL5AP2-201ENST00000444698 533 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA1FO60840 ST13P20-201ENST00000447996 1065 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA1FO60840 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.48□□□□□ -1.85
CACNA1FO60840 SRIP1-201ENST00000489235 288 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 LTV1P1-201ENST00000510683 1237 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC011352.1-201ENST00000512300 793 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC109445.1-201ENST00000512356 383 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AP002812.4-201ENST00000532139 286 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.48□□□□□ -1.85
CACNA1FO60840 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CACNA1FO60840 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA1FO60840 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA1FO60840 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.48□□□□□ -1.85
CACNA1FO60840 MIR3124-201ENST00000582636 67 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AP005137.2-201ENST00000609238 400 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC025588.4-201ENST00000615802 908 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC116165.2-201ENST00000616705 206 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC116618.1-201ENST00000634617 774 ntBASIC3.48□□□□□ -1.85
CACNA1FO60840 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CACNA1FO60840 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CACNA1FO60840 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA1FO60840 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AL079342.2-201ENST00000403367 482 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AL663109.1-201ENST00000411498 844 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 UBE2V1P10-201ENST00000414685 269 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 ELOCP17-201ENST00000414751 326 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC073069.1-201ENST00000428657 441 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AP001025.2-201ENST00000490908 477 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 SNORA9.3-201ENST00000516383 129 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms