Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 MIR4311-201ENST00000580794 100 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
HOXA2O43364 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXA2O43364 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 OLMALINC-203ENST00000641087 3779 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 AL138820.1-201ENST00000617901 5305 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXA2O43364 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXA2O43364 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 AC090971.4-201ENST00000560291 1800 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXA2O43364 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXA2O43364 MTND5P9-201ENST00000503854 1755 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 RNA5SP183-201ENST00000362452 119 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 Y_RNA.458-201ENST00000384240 102 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 SNORD115-46-201ENST00000390982 71 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 CYCSP33-201ENST00000414485 327 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC063979.1-201ENST00000415539 377 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AL353621.1-201ENST00000418219 243 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AL354766.1-201ENST00000423396 542 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 PPP1R11P2-201ENST00000423543 382 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 RPL7L1P9-201ENST00000431298 745 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC092573.2-201ENST00000434546 243 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC090774.1-201ENST00000435925 246 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 GAPDHP58-201ENST00000438477 1006 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC098831.1-201ENST00000440661 216 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA2O43364 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXA2O43364 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXA2O43364 TRBV5-2-201ENST00000489095 273 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 RN7SL447P-201ENST00000494711 245 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC008716.1-201ENST00000511084 513 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC074250.1-201ENST00000511117 192 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AL671862.1-201ENST00000515851 349 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC093023.1-201ENST00000547375 507 ntBASIC6.09□□□□□ -1.43
HOXA2O43364 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA2O43364 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXA2O43364 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXA2O43364 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HOXA2O43364 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA2O43364 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HOXA2O43364 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.09□□□□□ -1.44
HOXA2O43364 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
HOXA2O43364 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HOXA2O43364 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA2O43364 AC025470.1-201ENST00000510053 2032 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA2O43364 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 Y_RNA.439-201ENST00000384119 94 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA2O43364 MIR937-201ENST00000401271 86 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 RNA5SP296-201ENST00000410523 111 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 DPPA2P3-201ENST00000411853 655 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXA2O43364 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXA2O43364 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXA2O43364 RNU7-120P-201ENST00000459334 63 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 AC087190.1-201ENST00000484462 480 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 AC107032.1-201ENST00000485945 480 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 RPS21P4-201ENST00000487122 248 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 RPS15AP34-201ENST00000487776 387 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXA2O43364 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA2O43364 AP002392.1-201ENST00000537692 208 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA2O43364 FKBP1BP1-201ENST00000553366 325 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA2O43364 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXA2O43364 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXA2O43364 MIR7155-201ENST00000615925 56 ntBASIC6.08□□□□□ -1.44
HOXA2O43364 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA2O43364 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXA2O43364 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms