Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AL389915.2-201ENST00000454576 441 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-1211P-201ENST00000459179 105 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 U8.21-201ENST00000459536 136 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 MIR3691-201ENST00000578066 90 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AC067852.4-201ENST00000590314 478 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AC109583.2-201ENST00000617367 129 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AL450226.2-201ENST00000622913 439 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 ZNF826P-207ENST00000622273 1910 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AL033543.1-201ENST00000623440 13454 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 SNORA67-201ENST00000384423 137 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AL357139.1-201ENST00000407792 426 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 RNU4-65P-201ENST00000410473 140 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 OOSP1P1-201ENST00000423265 274 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 SRSF1P1-201ENST00000424058 520 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 RPL23AP33-201ENST00000442301 452 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 GAPDHP27-201ENST00000447427 1020 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AC010326.1-201ENST00000462726 602 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AC091959.1-201ENST00000495857 238 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 SNORA27.4-201ENST00000516650 95 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-352P-201ENST00000516908 107 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 Y_RNA.706-201ENST00000516933 99 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 MIR8076-201ENST00000611401 83 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 U1.34-201ENST00000618578 162 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AC008873.1-201ENST00000625051 138 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AL445487.1-201ENST00000415694 1580 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 AC110716.2-201ENST00000563865 3945 ntBASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC61Q9Y6R9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 Y_RNA.286-201ENST00000364813 102 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-21P-201ENST00000384710 107 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 Y_RNA.571-201ENST00000384753 98 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 MIR585-201ENST00000384887 94 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 MIR550A3-201ENST00000390735 95 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 SNORA12.2-201ENST00000391040 156 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 AL133388.1-201ENST00000404509 287 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 AC010631.1-201ENST00000474150 156 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 RN7SL97P-201ENST00000486780 299 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 MTND3P25-201ENST00000509243 135 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-941P-201ENST00000516346 108 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 AL133481.2-203ENST00000607558 139 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-84P-201ENST00000607737 102 ntBASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
CCDC61Q9Y6R9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms