Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC009812.4-201ENST00000569134 1805 ntBASIC1.7□□□□□ -2.14
AP4S1Q9Y587 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
AP4S1Q9Y587 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AL359715.4-201ENST00000606629 1436 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 FAM133CP-201ENST00000332869 704 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RNU6-1293P-201ENST00000384077 107 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 MIR23B-201ENST00000384832 97 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AL513475.1-201ENST00000406602 315 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RN7SKP32-201ENST00000410167 303 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RNU2-2P-201ENST00000410396 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RNU4-53P-201ENST00000410828 140 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RPL21P32-201ENST00000419877 477 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 PGBD4P6-201ENST00000421501 610 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 UBE2V1P13-201ENST00000436983 439 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 snoU13.22-201ENST00000459428 104 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RPL5P13-201ENST00000462840 709 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC096576.1-201ENST00000489014 359 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 EIF4EP3-201ENST00000498782 656 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 HMGB1P47-201ENST00000511281 589 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 SNORA70.24-201ENST00000517233 118 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 OR10V3P-201ENST00000525712 725 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 CASP1P1-201ENST00000526345 212 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC012213.4-201ENST00000606457 354 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 SNORD14A-201ENST00000606526 91 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.15-201ENST00000611544 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.16-201ENST00000613119 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.12-201ENST00000613778 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.20-201ENST00000613956 192 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 AC020658.4-201ENST00000613987 684 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.9-201ENST00000615427 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.11-201ENST00000616345 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.2-201ENST00000616535 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.3-201ENST00000617785 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.19-201ENST00000618602 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RNU2-1-201ENST00000618664 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.6-201ENST00000619225 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.5-201ENST00000619465 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 U2.10-201ENST00000620268 191 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 RNU6-156P-201ENST00000621869 107 ntBASIC1.69□□□□□ -2.14
AP4S1Q9Y587 SNORA64-201ENST00000384674 134 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AL121972.1-201ENST00000402023 252 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 MTCYBP29-201ENST00000436327 1006 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 RPL35AP22-201ENST00000436855 335 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC004924.1-201ENST00000480160 781 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC007182.2-201ENST00000489251 402 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC107393.1-201ENST00000512403 346 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC087272.1-201ENST00000523624 533 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC105036.1-201ENST00000566222 271 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 DEFB122-202ENST00000569013 197 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 MIR3117-201ENST00000584034 78 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC010928.2-201ENST00000588017 287 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 RPP40P2-201ENST00000603596 712 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC005000.2-201ENST00000605468 310 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 MIR7973-1-201ENST00000614683 76 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 RMST_5.1-201ENST00000618704 126 ntBASIC1.68□□□□□ -2.14
AP4S1Q9Y587 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.68□□□□□ -2.14
AP4S1Q9Y587 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 CYCSP45-201ENST00000402289 315 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 SNORD23.1-201ENST00000408212 104 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 RNU2-17P-201ENST00000410290 190 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 SNORD56-201ENST00000413522 71 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 NPM1P11-201ENST00000417106 855 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 RPL7P30-201ENST00000420888 709 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 OR4K11P-201ENST00000431829 904 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 COX6CP12-201ENST00000446748 202 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 SNRPGP6-201ENST00000451124 220 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 snoU13.7-201ENST00000459220 104 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms