Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 Y_RNA.797-201ENST00000515977 94 ntBASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 AC103996.1-201ENST00000555468 102 ntBASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 TRAV28-201ENST00000557548 323 ntBASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 MIR4431-201ENST00000579990 94 ntBASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 AC008814.1-201ENST00000603797 406 ntBASIC6.15□□□□□ -1.42
VPS9D1Q9Y2B5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS9D1Q9Y2B5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RNU6-1175P-201ENST00000365200 107 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RPL7AP51-201ENST00000422016 760 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AL031736.2-201ENST00000426573 787 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AC094019.1-201ENST00000434678 472 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AC099670.1-201ENST00000455141 783 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RPS29P27-201ENST00000463711 170 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RN7SL184P-201ENST00000488308 297 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AC006499.3-201ENST00000506077 748 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RN7SKP67-201ENST00000515905 235 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AC020916.2-201ENST00000591242 360 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 KLKP1-201ENST00000595979 403 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 MIR6130-201ENST00000619419 109 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AL137067.2-201ENST00000621202 131 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 AC010325.3-201ENST00000641084 394 ntBASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
VPS9D1Q9Y2B5 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AL365440.1-201ENST00000436135 2167 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 FTLP6-201ENST00000355274 422 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 RNU1-59P-201ENST00000364829 162 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 RNU4-9P-201ENST00000364951 139 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 RNU2-18P-201ENST00000411224 162 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 CTSL3P-202ENST00000412179 788 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AC015977.1-201ENST00000418887 292 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AL590399.4-201ENST00000436561 601 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 RPL26P26-201ENST00000480251 434 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AL035690.1-201ENST00000490892 383 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 MRPS33P2-201ENST00000507850 322 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AC107027.2-201ENST00000512197 115 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 Y_RNA.710-201ENST00000516975 110 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AC022616.8-201ENST00000533569 253 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AC024940.3-201ENST00000538551 316 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 NDUFB4P11-201ENST00000560510 395 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 SRGNP1-201ENST00000603392 451 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 U1.25-201ENST00000614085 162 ntBASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS9D1Q9Y2B5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms