Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RNU6-61P-201ENST00000365528 109 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 SNORD51-201ENST00000384320 80 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 SNORA24.1-201ENST00000384401 135 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 RNA5SP107-201ENST00000411358 122 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AL590139.1-201ENST00000416267 400 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC007529.1-201ENST00000418574 2178 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 RPS15AP40-201ENST00000419621 391 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC005094.1-201ENST00000440420 368 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 MTND5P22-201ENST00000458380 195 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 RPS20P21-201ENST00000466859 343 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 RN7SKP24-201ENST00000515888 284 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC090136.1-201ENST00000520009 240 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AP006289.1-201ENST00000538089 277 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AP000763.2-201ENST00000540641 163 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 MIR4293-201ENST00000584305 78 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC007566.2-201ENST00000603642 413 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AL451044.1-201ENST00000604867 238 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 MIR7703-201ENST00000620784 77 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 7SK.10-201ENST00000621414 298 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 OR14L1P-202ENST00000641545 3009 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 MFSD8-216ENST00000641147 4009 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 SNORD113.2-201ENST00000364166 89 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 RNU6-1105P-201ENST00000384774 107 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ENSAP1-201ENST00000392855 326 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 MIR921-201ENST00000401133 56 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 MIR937-201ENST00000401271 86 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AL590609.2-201ENST00000421430 368 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC004801.2-202ENST00000463559 283 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 MTCO3P44-201ENST00000510977 541 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC063950.1-201ENST00000552036 308 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 IMMP1LP2-201ENST00000552954 492 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 MIR4790-201ENST00000577799 79 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AL670379.11-201ENST00000604059 253 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AL670379.10-201ENST00000604330 253 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AL670379.12-201ENST00000605291 253 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AL670379.9-201ENST00000605428 253 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 AC012443.1-201ENST00000605605 231 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ZNF734P-201ENST00000419494 1534 ntBASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHA4Q9UN74 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHA4Q9UN74 Y_RNA.28-201ENST00000362554 111 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms