Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC079741.1-201ENST00000321498 212 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 FRG1CP-201ENST00000358464 769 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RNA5SP505-201ENST00000364748 108 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 UBE2V1P2-201ENST00000397758 440 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RNU4-65P-201ENST00000410473 140 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RN7SKP106-201ENST00000410832 272 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RPL21P24-201ENST00000413752 448 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 OR6C66P-201ENST00000414917 930 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC119751.6-201ENST00000416712 186 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL161631.1-201ENST00000417933 486 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 CKS1BP5-201ENST00000434172 273 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL590399.6-201ENST00000446396 307 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 PPIAP3-201ENST00000450588 505 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 CEACAMP6-201ENST00000452007 574 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 PPP1R2P5-201ENST00000457256 603 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RNU6-329P-201ENST00000459618 107 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC010326.1-201ENST00000462726 602 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RN7SL354P-201ENST00000469282 294 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC006463.2-201ENST00000473326 348 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RPL12P20-201ENST00000475538 479 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC007016.1-201ENST00000512110 244 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 SNORA19.2-201ENST00000516013 114 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.665-201ENST00000516177 98 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC103783.1-201ENST00000520506 373 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC026464.5-201ENST00000562497 722 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 RN7SL690P-201ENST00000582087 240 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC209154.1-201ENST00000582156 337 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC010928.3-201ENST00000587712 541 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC078795.3-201ENST00000602913 472 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC012443.1-201ENST00000605605 231 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 MIR7703-201ENST00000620784 77 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AL160413.1-201ENST00000622780 310 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC011155.2-201ENST00000623202 216 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 BDP1P-201ENST00000582658 1990 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AL672167.1-203ENST00000641299 2975 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AL139276.1-201ENST00000311910 1001 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 SNORA24.1-201ENST00000384401 135 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RNU6-831P-201ENST00000384548 107 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 MIR153-1-201ENST00000384914 90 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC245028.1-201ENST00000423259 256 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC018644.1-201ENST00000429934 551 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 MRPS18BP2-201ENST00000434310 759 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 HMGB1P18-201ENST00000438801 619 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RPL23AP33-201ENST00000442301 452 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC011753.3-201ENST00000443436 406 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AL513533.1-201ENST00000453728 415 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 SNRPFP3-201ENST00000457792 225 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 CYCSP34-201ENST00000458172 304 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 SNORD97-201ENST00000459187 142 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RPL7AP28-201ENST00000464513 571 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC108751.2-201ENST00000469993 231 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 SCARNA15.1-201ENST00000516384 125 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RNU6-1038P-201ENST00000516516 104 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RNU6-1092P-201ENST00000516955 87 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RN7SKP256-201ENST00000517201 314 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 RPL7P20-201ENST00000520308 745 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms