Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.52□□□□□ -2.01
HMG20AQ9NP66 AL355596.1-201ENST00000565399 3996 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 SNRPEP3-201ENST00000338402 276 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 SNORA54-201ENST00000384281 123 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 MIR34B-201ENST00000385076 84 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC068533.2-201ENST00000411872 306 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 OR10R1P-201ENST00000441524 1141 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC005297.2-201ENST00000450430 606 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 RFC5P1-201ENST00000454419 874 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC073901.1-201ENST00000462471 408 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC117440.1-201ENST00000474107 571 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 RPS3AP43-201ENST00000479743 781 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 SRIP1-201ENST00000489235 288 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 RN7SL504P-201ENST00000494496 287 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AL358832.1-201ENST00000497800 389 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 MTCYBP17-201ENST00000503579 789 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 MTCYBP16-201ENST00000509187 1129 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC108043.1-201ENST00000512696 574 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 RNU6-1225P-201ENST00000516336 65 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 HPRT1P3-201ENST00000539521 576 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC125611.1-201ENST00000549563 229 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC024257.5-201ENST00000612739 531 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC006963.1-201ENST00000624003 1052 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC120349.2-201ENST00000625002 298 ntBASIC2.51□□□□□ -2.01
HMG20AQ9NP66 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMG20AQ9NP66 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 GDI2P1-201ENST00000429312 1336 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC107982.1-201ENST00000507171 1300 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC244517.1-201ENST00000606030 2086 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 SNORA71.1-201ENST00000364523 117 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 FO393413.1-201ENST00000402892 195 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 RNU2-15P-201ENST00000410692 191 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL034418.1-201ENST00000448675 860 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 RPL5P24-201ENST00000463742 885 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC003982.1-202ENST00000469928 248 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AP000852.1-201ENST00000472460 573 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 MTCO3P35-201ENST00000485582 781 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC096751.1-202ENST00000502691 1067 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC008885.1-201ENST00000514930 301 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 RNU1-61P-201ENST00000516107 151 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 RNY4P37-201ENST00000516225 96 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 EEF1B2P4-201ENST00000551398 348 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 BNIP3P39-201ENST00000601077 554 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL355812.1-201ENST00000603215 216 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC015871.2-201ENST00000603605 948 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC069545.1-201ENST00000605671 358 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL139022.2-201ENST00000606934 443 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL159169.3-201ENST00000608871 561 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AL138478.1-201ENST00000612252 832 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC005332.6-201ENST00000613178 446 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 LINC02211-204ENST00000642024 1070 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms