Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC090136.1-201ENST00000520009 240 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AP001922.4-201ENST00000526967 290 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 DEFB109D-201ENST00000529497 240 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC021006.3-201ENST00000530771 192 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC008033.2-201ENST00000542626 177 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL117187.1-201ENST00000555482 181 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC008269.2-201ENST00000561915 1105 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 RNF138P2-201ENST00000603490 592 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC092747.3-201ENST00000603769 301 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC010680.4-201ENST00000605334 543 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 FAM25E-202ENST00000608562 189 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL049641.1-201ENST00000441055 1948 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 OR51H2P-202ENST00000641424 3046 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC008758.3-201ENST00000507003 1829 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-1287P-201ENST00000362914 107 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 SNORD115-7-201ENST00000365306 82 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-1060P-201ENST00000384664 107 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL591848.1-201ENST00000413092 322 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 COX6B1P1-201ENST00000415962 213 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL139396.1-201ENST00000421137 167 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 NUP35P1-201ENST00000422734 947 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 MTCYBP10-201ENST00000424905 650 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 DHFRP3-201ENST00000455595 559 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 BTF3P15-201ENST00000455606 336 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 ELOCP24-201ENST00000456370 334 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC022034.3-201ENST00000471393 478 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 COX7A2P2-201ENST00000505291 250 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC134698.5-201ENST00000519444 336 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC063949.1-201ENST00000552900 865 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL049839.1-201ENST00000556151 657 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL133153.1-201ENST00000557756 303 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC012409.4-201ENST00000612923 249 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC083806.3-201ENST00000614016 455 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 MIR6730-201ENST00000622213 67 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC007792.1-201ENST00000623023 402 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC091953.3-201ENST00000623220 236 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AC092079.1-201ENST00000558620 1985 ntBASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A2Q9H9S3 AL136164.3-201ENST00000624429 3978 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 MAPK10-263ENST00000641052 4307 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 RNA5SP191-201ENST00000362585 102 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.112-201ENST00000363250 102 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms