Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 MTND6P12-201ENST00000428247 522 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AL034399.1-201ENST00000451535 380 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 VPS25P1-201ENST00000455691 508 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 ZNF519P4-201ENST00000514008 125 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 snoMBII-202.2-201ENST00000517263 86 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AP005639.1-201ENST00000526939 192 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AC007225.2-201ENST00000562529 256 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 SNORA70D-201ENST00000578836 135 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AC119403.2-201ENST00000590960 598 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AC010632.3-201ENST00000611377 369 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AC116158.1-201ENST00000560231 2129 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 AC005725.1-201ENST00000577346 2607 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 RNU4-10P-201ENST00000364383 140 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 RNU6-19P-201ENST00000384718 107 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 MTHFD2P2-201ENST00000407725 247 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 AL590128.1-201ENST00000433407 286 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 SNRPBP1-201ENST00000443634 282 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 AC079905.1-201ENST00000549280 475 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 DEFB117-201ENST00000602356 141 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 AC105749.1-201ENST00000631338 2008 ntBASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCAF1Q9H7N4 RNA5SP284-201ENST00000384547 118 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 SNORD72-201ENST00000390994 80 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 PNKDP1-201ENST00000435914 430 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AL121914.1-201ENST00000450188 156 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AC007537.1-201ENST00000539347 327 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AC005476.1-201ENST00000554427 397 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 OR4H12P-201ENST00000556269 907 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AC020916.2-201ENST00000591242 360 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AP000756.2-201ENST00000624168 2567 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 U3.52-201ENST00000384034 216 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AL592045.1-201ENST00000429867 352 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 TRAPPC2P9-201ENST00000434556 343 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AL353705.4-201ENST00000449661 238 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 RNU6-1007P-201ENST00000516586 107 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 RNU6-453P-201ENST00000516819 85 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 IGLVIV-53-201ENST00000520107 367 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 IGLV2-28-201ENST00000520681 304 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 MIR1273E-201ENST00000581165 102 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 AC008121.1-201ENST00000603244 268 ntBASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCAF1Q9H7N4 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 SNORA72.2-201ENST00000365028 127 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms