Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
ZNF560Q96MR9 AC103798.2-201ENST00000624292 632 ntBASIC3.3□□□□□ -1.88
ZNF560Q96MR9 AC231657.1-201ENST00000624313 397 ntBASIC3.3□□□□□ -1.88
ZNF560Q96MR9 AC010608.3-201ENST00000625048 527 ntBASIC3.3□□□□□ -1.88
ZNF560Q96MR9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF560Q96MR9 AC009812.4-201ENST00000569134 1805 ntBASIC3.3□□□□□ -1.88
ZNF560Q96MR9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 ZNF833P-201ENST00000424938 1494 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RNU4-68P-201ENST00000364314 141 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 SNORA54-201ENST00000384281 123 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RNU2-43P-201ENST00000410306 190 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC096664.2-201ENST00000411843 406 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RPL27AP8-201ENST00000424277 446 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 MTCYBP45-201ENST00000435243 565 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC104308.1-201ENST00000454621 333 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RNU7-136P-201ENST00000458819 69 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RPL7P23-201ENST00000493874 747 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC134050.1-201ENST00000495088 933 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC109445.1-201ENST00000512356 383 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RNY4P37-201ENST00000516225 96 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RNA5SP380-201ENST00000517190 98 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AL512347.1-201ENST00000566420 503 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 OR4K8P-201ENST00000578842 1048 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC013444.2-201ENST00000603317 787 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 RPP40P2-201ENST00000603596 712 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AL160281.1-201ENST00000605307 311 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC009570.1-201ENST00000609599 745 ntBASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF560Q96MR9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC099786.3-201ENST00000565735 1410 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 MTND5P24-201ENST00000438892 1767 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 GNG5P1-201ENST00000255500 204 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 FRG1BP-201ENST00000278882 761 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 SNORD56.3-201ENST00000363507 71 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 Y_RNA.311-201ENST00000365068 96 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 RNU1-101P-201ENST00000391171 127 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 RN7SKP220-201ENST00000410611 288 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 Z92545.1-201ENST00000411782 234 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 SSXP9-201ENST00000417503 292 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 FTH1P1-201ENST00000437933 532 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC093392.2-201ENST00000450682 337 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC005410.1-202ENST00000460347 485 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 HMGN2P13-201ENST00000476476 274 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 OR2A20P-203ENST00000498397 1268 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC114967.1-201ENST00000504890 259 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC103783.1-201ENST00000520506 373 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 FAM60DP-201ENST00000524174 632 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 DEFB131D-201ENST00000526803 184 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AP002826.1-201ENST00000608835 315 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AL157392.4-201ENST00000609756 345 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC107075.1-201ENST00000613695 314 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC002076.2-201ENST00000617362 122 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC011330.2-201ENST00000621680 635 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AL445264.1-201ENST00000621719 171 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF560Q96MR9 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
ZNF560Q96MR9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 DEFB108F-201ENST00000344638 222 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 RNU6-525P-201ENST00000363685 104 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 RNU4-92P-201ENST00000363783 136 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 SNORD116.1-201ENST00000365628 92 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 Y_RNA.465-201ENST00000384293 102 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 SNORA48.2-201ENST00000390926 124 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms