Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPGRIP1Q96KN7 CDR1-202ENST00000625883 1485 ntBASIC3.4□□□□□ -1.87
RPGRIP1Q96KN7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 ERHP2-201ENST00000402323 299 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AL590084.1-201ENST00000407885 387 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 RNU6-712P-201ENST00000410558 100 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 RNA5SP344-201ENST00000411081 104 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC068533.2-201ENST00000411872 306 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC022018.1-201ENST00000430685 241 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 MTCYBP11-201ENST00000447254 1109 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 RPL39P6-201ENST00000448289 150 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AL445669.2-201ENST00000454425 421 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC005832.3-201ENST00000537929 631 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 H3F3AP1-201ENST00000559984 334 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 MTCO3P24-201ENST00000572729 782 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 MAGOH2P-202ENST00000584384 429 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 BNIP3P24-201ENST00000593398 557 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 RPP40P2-201ENST00000603596 712 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC022960.3-201ENST00000619794 441 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AC090772.4-201ENST00000623599 362 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 AL136164.4-201ENST00000625013 2135 ntBASIC3.39□□□□□ -1.87
RPGRIP1Q96KN7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 RNU4-68P-201ENST00000364314 141 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AL354719.1-201ENST00000406535 843 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AL513175.2-201ENST00000422071 443 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 RPL7P46-201ENST00000425129 740 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC092427.1-201ENST00000439177 601 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 TRIM60P18-201ENST00000441518 828 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC007327.1-201ENST00000447461 264 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 USP9YP34-201ENST00000453983 808 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 DUXAP8-207ENST00000456786 622 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 RPS15AP17-201ENST00000470598 390 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC006483.1-201ENST00000487308 313 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 HMGB1P28-201ENST00000507778 552 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC026412.2-201ENST00000512270 1075 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 RNA5SP356-201ENST00000515972 94 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 RNU1-61P-201ENST00000516107 151 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 OR4P1P-201ENST00000530808 1136 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 SLC2A13P1-201ENST00000531560 322 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 GTF3AP2-201ENST00000557014 266 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AL049838.1-201ENST00000563647 981 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 UBL5P2-201ENST00000583788 219 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 MTCO2P2-201ENST00000591258 225 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 BNIP3P40-201ENST00000596017 556 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC245036.5-201ENST00000596330 847 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AC106052.1-201ENST00000608029 497 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 DUXAP10-204ENST00000612052 616 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AL157817.1-201ENST00000614264 790 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.38□□□□□ -1.87
RPGRIP1Q96KN7 AF117829.1-206ENST00000621883 3802 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 OR5J1P-201ENST00000313544 939 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 RNU6-560P-201ENST00000364007 108 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 SNORD116.1-201ENST00000365628 92 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AL139095.1-201ENST00000404326 391 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AC092447.6-201ENST00000414578 210 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AC093151.1-201ENST00000427711 313 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 USP9YP24-201ENST00000434374 697 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 RABEPKP1-201ENST00000440529 1026 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 USP9YP17-201ENST00000444617 696 ntBASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.37□□□□□ -1.87
RPGRIP1Q96KN7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms