Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CYCSP43-201ENST00000438233 310 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 NEFMP1-201ENST00000443423 1006 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 CYCSP34-201ENST00000458172 304 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 RPL21P103-201ENST00000479921 488 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
IFT43Q96FT9 RN7SL447P-201ENST00000494711 245 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC091912.1-201ENST00000511351 248 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 RNU6-390P-201ENST00000516259 103 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 RNU6-941P-201ENST00000516346 108 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 RNA5SP384-201ENST00000516615 116 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
IFT43Q96FT9 AP006587.4-201ENST00000526053 529 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC040958.1-201ENST00000561102 201 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC104763.2-201ENST00000604179 382 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 AL161423.1-201ENST00000613700 262 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC078938.1-201ENST00000620993 318 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 MIR6730-201ENST00000622213 67 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 AC067931.1-201ENST00000624190 671 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 MIR4496-201ENST00000635896 61 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
IFT43Q96FT9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 SAGE2P-201ENST00000420011 2126 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 MTND5P27-201ENST00000428871 1720 ntBASIC5.51□□□□□ -1.53
IFT43Q96FT9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
IFT43Q96FT9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
IFT43Q96FT9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 HSPA8P4-201ENST00000511877 1920 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 Y_RNA.2-201ENST00000362330 96 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 Y_RNA.424-201ENST00000384063 103 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RNU6-190P-201ENST00000384154 102 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 Y_RNA.447-201ENST00000384184 113 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RNU6-306P-201ENST00000384617 107 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 PPIAP9-201ENST00000403866 498 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC099677.1-201ENST00000420575 175 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RPL12P34-201ENST00000424532 479 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RPL7L1P9-201ENST00000431298 745 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC105399.1-202ENST00000447303 205 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 IGHV5-78-201ENST00000450948 295 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC002553.2-201ENST00000453217 340 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RPS3AP41-201ENST00000462701 778 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 RN7SL515P-201ENST00000463999 297 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC092324.1-201ENST00000468671 324 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC092754.1-201ENST00000472975 479 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC090686.1-201ENST00000481577 749 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 DEFB109F-201ENST00000491870 277 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 RNU6-120P-201ENST00000516077 103 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC022616.4-201ENST00000522985 181 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 MIR4716-201ENST00000579628 84 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 MIR7853-201ENST00000584820 132 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 AL021879.1-201ENST00000611756 288 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC138627.2-201ENST00000624202 601 ntBASIC5.5□□□□□ -1.53
IFT43Q96FT9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT43Q96FT9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
IFT43Q96FT9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
IFT43Q96FT9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.49□□□□□ -1.53
IFT43Q96FT9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
IFT43Q96FT9 AP005432.1-201ENST00000580891 3485 ntBASIC5.49□□□□□ -1.53
IFT43Q96FT9 RNU6-249P-201ENST00000363016 102 ntBASIC5.49□□□□□ -1.53
IFT43Q96FT9 RNU6-266P-201ENST00000364225 107 ntBASIC5.49□□□□□ -1.53
IFT43Q96FT9 SNORA58B-201ENST00000364259 136 ntBASIC5.49□□□□□ -1.53
IFT43Q96FT9 RNU6-450P-201ENST00000364654 107 ntBASIC5.49□□□□□ -1.53
IFT43Q96FT9 Y_RNA.288-201ENST00000364854 92 ntBASIC5.49□□□□□ -1.53
IFT43Q96FT9 SNORA70-201ENST00000384436 135 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms