Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 RPS15AP10-201ENST00000432472 382 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 RPS17P8-201ENST00000434525 335 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC104332.1-201ENST00000440471 797 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 RNU6-953P-201ENST00000459154 107 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 RN7SL481P-201ENST00000477764 299 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC105384.2-201ENST00000508433 640 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC074255.1-201ENST00000511259 501 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 ELOCP5-201ENST00000604924 333 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC087783.2-201ENST00000605070 562 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AL133481.2-203ENST00000607558 139 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AL450472.3-201ENST00000615578 367 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC090607.5-201ENST00000615692 224 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 U73479.1-201ENST00000618062 168 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC091903.1-201ENST00000624322 454 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AL512643.1-201ENST00000635735 524 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC093849.1-201ENST00000563631 2209 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AL672167.1-205ENST00000641112 3080 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AC004076.2-201ENST00000620532 3323 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AC010266.2-201ENST00000564741 3255 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RNU6-1303P-201ENST00000364841 107 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RNA5SP30-201ENST00000365552 115 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RNA5SP339-201ENST00000390987 122 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RNU6-817P-201ENST00000391083 104 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 GLULP6-201ENST00000399502 913 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RPL21P1-201ENST00000399532 476 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RN7SKP17-201ENST00000411242 351 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RPS27AP12-201ENST00000429552 465 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 FTH1P25-201ENST00000447665 469 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RPL12P39-201ENST00000455456 496 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 MED28P2-201ENST00000475771 317 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 RAB9BP1-201ENST00000519581 626 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 ERHP1-201ENST00000523006 310 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 BNIP3P1-201ENST00000547295 580 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 HMGB3P26-201ENST00000560051 582 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 HMGN2P28-201ENST00000606102 262 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 AC096772.1-201ENST00000609146 564 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 MIR7641-1-201ENST00000627518 61 ntBASIC5.82□□□□□ -1.48
RNF135Q8IUD6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF135Q8IUD6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC092070.2-203ENST00000598377 3644 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.151-201ENST00000363566 112 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 RNU6-288P-201ENST00000363690 104 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms