Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 RNY4P16-201ENST00000364768 94 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 SNORA20.2-201ENST00000383922 131 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 RNU6-1207P-201ENST00000384343 107 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 RNU6-456P-201ENST00000384493 107 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 RNU6-878P-201ENST00000384578 110 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 Y_RNA.529-201ENST00000384586 119 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AL583835.1-201ENST00000399570 407 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 MRPL42P2-201ENST00000403169 426 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AL356421.1-201ENST00000403255 413 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 OR9R1P-201ENST00000412200 877 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 RPL23AP26-201ENST00000412728 464 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 FAR2P2-201ENST00000413041 594 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC127526.1-201ENST00000417526 366 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AL161631.1-201ENST00000417933 486 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 COX6CP15-201ENST00000426313 211 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 PSMA6P3-201ENST00000428242 164 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AL606489.2-201ENST00000433886 234 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 HMGB3P12-201ENST00000438745 556 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 CALM1P1-201ENST00000442082 433 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AP1S2P1-201ENST00000457344 379 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC093267.1-201ENST00000489176 961 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC055855.1-201ENST00000489563 579 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC079382.1-201ENST00000493346 557 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC002456.2-201ENST00000509356 380 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 NPM1P41-201ENST00000512920 831 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 IGLVIV-65-201ENST00000517313 360 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 CYP4A43P-201ENST00000568156 121 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC006270.2-201ENST00000578523 652 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC044792.1-201ENST00000593294 196 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 MIR432-201ENST00000606207 94 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 FAM27D1-201ENST00000612308 341 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC009233.1-201ENST00000616477 371 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 AC027290.2-201ENST00000623210 18662 ntBASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RNU4-73P-201ENST00000363164 141 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RNU1-32P-201ENST00000363937 159 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RNU6-1011P-201ENST00000384668 107 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RNU6-328P-201ENST00000390887 106 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 MIR1179-201ENST00000408703 91 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC006548.1-201ENST00000427470 102 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC017083.1-201ENST00000428093 483 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RPL23AP30-201ENST00000432419 501 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 HLA-N-201ENST00000437516 135 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 USP9YP15-201ENST00000442391 422 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC009963.2-201ENST00000453431 138 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RPS20P20-201ENST00000460498 340 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 LRRC34P2-201ENST00000514850 553 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 SNORA40.12-201ENST00000516329 111 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AP003497.1-201ENST00000528472 562 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 OR5B19P-201ENST00000531766 928 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC055876.1-202ENST00000567053 138 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 RPS3AP23-202ENST00000574601 686 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC053481.3-201ENST00000577881 843 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC244505.7-201ENST00000599675 272 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC068790.4-201ENST00000602474 263 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC121334.2-201ENST00000605387 271 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AL031666.3-201ENST00000609320 1006 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC128687.2-201ENST00000609657 566 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AC135507.2-201ENST00000612443 309 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AL596245.1-201ENST00000618994 362 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 AL445363.3-201ENST00000623080 671 ntBASIC3.69□□□□□ -1.82
COLCA1Q6ZS62 CR381572.1-201ENST00000625098 102 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms