Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPL21P91-201ENST00000429231 479 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 SNAP23P1-201ENST00000433229 246 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 RPL34P20-201ENST00000442771 351 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 RPL23AP43-201ENST00000446445 471 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 RN7SL354P-201ENST00000469282 294 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 RPL21P93-201ENST00000480465 489 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 IGLV2-34-201ENST00000490007 283 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC116337.1-201ENST00000509680 687 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 HIGD1AP13-201ENST00000509878 289 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 RNU6-1023P-201ENST00000516137 106 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 OR11H5P-201ENST00000554039 926 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 HMGB3P26-201ENST00000560051 582 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 IGHV3-29-201ENST00000604817 344 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC245517.5-201ENST00000611529 162 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 U6.114-201ENST00000636407 96 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF43Q68DV7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF43Q68DV7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNF43Q68DV7 MAPK10-304ENST00000641341 3984 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 Y_RNA.380-201ENST00000365663 111 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 Y_RNA.477-201ENST00000384352 108 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 MT-TW-201ENST00000387382 68 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 MIR450B-201ENST00000401182 78 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 RPS16P5-201ENST00000406501 404 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 Y_RNA.594-201ENST00000410373 140 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 RNU2-50P-201ENST00000410494 143 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 E2F6P2-201ENST00000420708 748 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 OR2AM1P-201ENST00000422137 422 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 RPS15AP10-201ENST00000432472 382 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC236972.1-201ENST00000433225 199 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AL590664.1-201ENST00000448065 339 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 HMGB3P30-201ENST00000457863 606 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC103987.1-201ENST00000473394 348 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC025465.3-201ENST00000510570 311 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 RNU6-138P-201ENST00000515952 107 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 CYCSP28-201ENST00000534284 321 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC209154.1-201ENST00000582156 337 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 AC006272.2-201ENST00000594725 163 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 AL031320.1-201ENST00000604177 357 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 SNORD58B-201ENST00000607313 66 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 ATP5A1P2-202ENST00000616464 443 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF43Q68DV7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF43Q68DV7 PCAT14-202ENST00000627127 3935 ntBASIC5.26□□□□□ -1.57
RNF43Q68DV7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF43Q68DV7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF43Q68DV7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC020633.1-201ENST00000468439 2247 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC011460.1-201ENST00000636268 1834 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF43Q68DV7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF43Q68DV7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF43Q68DV7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF43Q68DV7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 RNU6-562P-201ENST00000362731 107 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 Y_RNA.106-201ENST00000363189 100 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RNU6-774P-201ENST00000363238 107 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RN7SKP113-201ENST00000363891 295 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 Y_RNA.424-201ENST00000384063 103 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 U3.20-201ENST00000390909 217 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AL445529.1-201ENST00000398713 389 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 MIR548I2-201ENST00000408348 149 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RNU2-38P-201ENST00000410856 79 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms