Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC016065.2-201ENST00000514530 444 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 RNU6-559P-201ENST00000516151 98 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 RNU6-864P-201ENST00000516256 108 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 IGLVIV-53-201ENST00000520107 367 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 HMGB1P41-201ENST00000520234 440 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 DEFB109D-201ENST00000529497 240 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 FRG2DP-202ENST00000566967 323 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC009852.2-201ENST00000567898 485 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 MIR4703-201ENST00000577728 79 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 SNRPGP17-201ENST00000603780 214 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 DPPA3P3-201ENST00000603842 430 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AL031666.3-201ENST00000609320 1006 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AP001005.3-201ENST00000622049 129 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC015871.5-202ENST00000623252 701 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC034229.5-201ENST00000624258 185 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 MUC2-202ENST00000613187 4845 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC107027.3-201ENST00000565095 3473 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 MIR331-201ENST00000362302 94 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 SNORA63C-201ENST00000364578 129 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.373-201ENST00000365600 103 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 RNU6-1029P-201ENST00000384109 107 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AL583835.1-201ENST00000399570 407 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AL592291.1-201ENST00000403830 352 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 RPL36AP10-201ENST00000421785 322 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 RPL35AP22-201ENST00000436855 335 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 SNRPFP3-201ENST00000457792 225 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 RNU7-180P-201ENST00000459240 63 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 RPS20P21-201ENST00000466859 343 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC010683.1-201ENST00000473673 378 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC110792.2-201ENST00000510278 224 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 NARSP2-201ENST00000518524 679 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 ELOCP31-201ENST00000540463 467 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC012182.1-201ENST00000570133 895 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 POLR3GP2-201ENST00000588366 668 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 CYP2C61P-201ENST00000604072 290 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC025588.3-201ENST00000604182 274 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC113403.1-201ENST00000604910 193 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AL592436.1-201ENST00000605135 558 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC015908.5-201ENST00000623289 343 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 U6.114-201ENST00000636407 96 ntBASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USPL1Q5W0Q7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 RNU6-179P-201ENST00000363350 107 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 RNVU1-3-201ENST00000364313 161 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 RNA5SP171-201ENST00000391071 115 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 RPL36AP13-201ENST00000457490 317 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AL445433.1-201ENST00000457507 257 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 HMGB1P21-201ENST00000502313 581 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AC092436.1-201ENST00000506450 503 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 MTND4P7-201ENST00000523876 130 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AL133153.1-201ENST00000557756 303 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 MIR3936-201ENST00000584304 110 ntBASIC5.68□□□□□ -1.5
USPL1Q5W0Q7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms