Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL138889.2-201ENST00000603883 242 ntBASIC6□□□□□ -1.45
CTC1Q2NKJ3 AC012443.1-201ENST00000605605 231 ntBASIC6□□□□□ -1.45
CTC1Q2NKJ3 NANOGP3-201ENST00000605855 286 ntBASIC6□□□□□ -1.45
CTC1Q2NKJ3 AC100827.5-201ENST00000615883 426 ntBASIC6□□□□□ -1.45
CTC1Q2NKJ3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6□□□□□ -1.45
CTC1Q2NKJ3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CTC1Q2NKJ3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CTC1Q2NKJ3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6□□□□□ -1.45
CTC1Q2NKJ3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CTC1Q2NKJ3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CTC1Q2NKJ3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC010266.2-201ENST00000564741 3255 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC011933.2-201ENST00000578539 2790 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC114774.1-201ENST00000507410 1770 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC004158.1-201ENST00000564508 4319 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 Y_RNA.143-201ENST00000363520 106 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 Y_RNA.488-201ENST00000384403 102 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 UBE2V1P4-201ENST00000425374 344 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 RPS29P22-201ENST00000472363 168 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 SNRPCP2-201ENST00000504370 475 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC097462.2-201ENST00000504623 481 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 CYCSP27-201ENST00000527643 293 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC126615.2-201ENST00000553003 515 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC009962.1-201ENST00000567327 3813 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC006254.2-201ENST00000603259 279 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC000068.2-201ENST00000608816 460 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 MTND1P7-201ENST00000632801 297 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC020633.1-201ENST00000468439 2247 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 THAP12P9-201ENST00000503971 2360 ntBASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CTC1Q2NKJ3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 LINC02555-201ENST00000563933 1951 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 MAPK10-338ENST00000641647 3362 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 RNA5SP258-201ENST00000362750 119 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 SNORA63.4-201ENST00000362763 126 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 Y_RNA.439-201ENST00000384119 94 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 Y_RNA.581-201ENST00000391017 97 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 MTCYBP2-201ENST00000407745 171 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 FAR2P2-201ENST00000413041 594 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC007389.2-201ENST00000434630 306 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC006466.1-201ENST00000438721 289 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AZGP1P2-201ENST00000454506 345 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 ACA64.4-201ENST00000459070 127 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC090602.1-201ENST00000469695 252 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC093840.1-201ENST00000511599 336 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 RNU6-1219P-201ENST00000516143 112 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AC012616.1-201ENST00000600294 197 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AP002799.1-201ENST00000623552 423 ntBASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTC1Q2NKJ3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms