Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RPL21P131-201ENST00000497298 483 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 RNU6-1028P-201ENST00000517164 93 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.15□□□□□ -1.91
COL16A1Q07092 MIR4789-201ENST00000577469 82 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AC069304.3-201ENST00000603938 1084 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AC128687.1-201ENST00000605304 619 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AL158042.1-201ENST00000605338 460 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.15□□□□□ -1.91
COL16A1Q07092 GTF2H2B-203ENST00000508065 1432 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL16A1Q07092 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL16A1Q07092 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL16A1Q07092 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL16A1Q07092 RNU6-1214P-201ENST00000363650 109 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.14□□□□□ -1.91
COL16A1Q07092 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL16A1Q07092 MIR513B-201ENST00000385136 84 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 RNU2-17P-201ENST00000410290 190 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 RNU4-22P-201ENST00000411058 166 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 XKRYP4-201ENST00000414395 483 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AL158825.1-201ENST00000414735 521 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 ATG3P1-201ENST00000419507 911 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 VN1R108P-201ENST00000431580 830 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.14□□□□□ -1.91
COL16A1Q07092 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.14□□□□□ -1.91
COL16A1Q07092 XKRYP5-201ENST00000449659 483 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.14□□□□□ -1.91
COL16A1Q07092 AL096803.2-201ENST00000450032 677 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AL445669.2-201ENST00000454425 421 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.14□□□□□ -1.91
COL16A1Q07092 AC079203.1-201ENST00000487972 404 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AC106872.2-201ENST00000494303 480 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.14□□□□□ -1.91
COL16A1Q07092 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.14□□□□□ -1.91
COL16A1Q07092 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.14□□□□□ -1.91
COL16A1Q07092 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.14□□□□□ -1.91
COL16A1Q07092 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.14□□□□□ -1.91
COL16A1Q07092 PIGPP4-201ENST00000584447 307 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AC110760.3-201ENST00000598794 467 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AC018638.7-201ENST00000605836 1114 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.14□□□□□ -1.91
COL16A1Q07092 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AC013470.4-201ENST00000619978 986 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 AC090897.3-201ENST00000636973 1157 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 MIR3974-201ENST00000637126 96 ntBASIC3.14□□□□□ -1.91
COL16A1Q07092 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.13□□□□□ -1.91
COL16A1Q07092 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL16A1Q07092 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
COL16A1Q07092 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL16A1Q07092 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.13□□□□□ -1.91
COL16A1Q07092 RNU6-1242P-201ENST00000391052 103 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 RPL7P27-201ENST00000403775 720 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AL162578.1-201ENST00000406202 378 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.13□□□□□ -1.91
COL16A1Q07092 HMGB1P49-201ENST00000418882 569 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.13□□□□□ -1.91
COL16A1Q07092 AL353729.1-201ENST00000425044 720 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AL589880.1-201ENST00000448271 287 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 snoU13.18-201ENST00000459483 104 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AC011037.1-201ENST00000483964 558 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.13□□□□□ -1.91
COL16A1Q07092 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.13□□□□□ -1.91
COL16A1Q07092 MTCYBP20-201ENST00000524239 1129 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.13□□□□□ -1.91
COL16A1Q07092 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.13□□□□□ -1.91
COL16A1Q07092 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.13□□□□□ -1.91
COL16A1Q07092 AC109446.2-201ENST00000567872 497 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 MIR5092-201ENST00000583139 88 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.13□□□□□ -1.91
COL16A1Q07092 AC110741.2-201ENST00000605278 268 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AC080013.3-201ENST00000606839 578 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AL138478.1-201ENST00000612252 832 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.13□□□□□ -1.91
COL16A1Q07092 AC026585.1-201ENST00000619582 524 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 AC017037.3-201ENST00000625016 472 ntBASIC3.13□□□□□ -1.91
COL16A1Q07092 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL16A1Q07092 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL16A1Q07092 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL16A1Q07092 MTND5P11-201ENST00000511037 1812 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 RPL9P7-201ENST00000330965 580 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL16A1Q07092 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL16A1Q07092 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
COL16A1Q07092 RNU5B-1-201ENST00000363286 116 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 Y_RNA.169-201ENST00000363745 96 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 MIR3074-201ENST00000384885 81 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 MIR499A-201ENST00000384903 122 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
COL16A1Q07092 MIR1183-201ENST00000408856 89 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 RPL26P37-201ENST00000411983 438 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL16A1Q07092 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.12□□□□□ -1.91
COL16A1Q07092 AC023128.2-201ENST00000420880 1223 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 AC090960.1-201ENST00000421072 306 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL16A1Q07092 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.12□□□□□ -1.91
COL16A1Q07092 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.12□□□□□ -1.91
COL16A1Q07092 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.12□□□□□ -1.91
COL16A1Q07092 USP9YP25-201ENST00000457708 443 ntBASIC3.12□□□□□ -1.91
COL16A1Q07092 AC107015.1-201ENST00000466902 747 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms