Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.37□□□□□ -1.87
GABPAQ06546 AC111000.2-201ENST00000507775 550 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AC010625.1-201ENST00000511296 403 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.37□□□□□ -1.87
GABPAQ06546 SNORA31.20-201ENST00000517111 133 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GABPAQ06546 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.37□□□□□ -1.87
GABPAQ06546 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.37□□□□□ -1.87
GABPAQ06546 EEF1B2P4-201ENST00000551398 348 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.37□□□□□ -1.87
GABPAQ06546 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.37□□□□□ -1.87
GABPAQ06546 HSPE1P3-201ENST00000559254 309 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 VN1R90P-201ENST00000595717 726 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.37□□□□□ -1.87
GABPAQ06546 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AC091046.2-201ENST00000620775 665 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.37□□□□□ -1.87
GABPAQ06546 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
GABPAQ06546 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GABPAQ06546 AC244517.1-201ENST00000606030 2086 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.37□□□□□ -1.87
GABPAQ06546 AC138915.3-201ENST00000562908 1389 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GABPAQ06546 AP001350.1-201ENST00000601906 1524 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC062016.1-201ENST00000355719 319 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 SNORA51.2-201ENST00000364595 132 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.36□□□□□ -1.87
GABPAQ06546 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.36□□□□□ -1.87
GABPAQ06546 ANAPC10P1-201ENST00000395991 556 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.36□□□□□ -1.87
GABPAQ06546 RNU6-712P-201ENST00000410558 100 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AL592148.1-201ENST00000413568 445 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC245054.2-201ENST00000415639 319 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 MTCO3P12-201ENST00000416718 547 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.36□□□□□ -1.87
GABPAQ06546 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.36□□□□□ -1.87
GABPAQ06546 RPL21P66-201ENST00000426566 466 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC087499.2-201ENST00000432861 149 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 COX7BP2-201ENST00000437976 242 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.36□□□□□ -1.87
GABPAQ06546 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.36□□□□□ -1.87
GABPAQ06546 HMGB1P25-201ENST00000468402 607 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 RPL31P13-201ENST00000484151 370 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC110760.3-202ENST00000515177 371 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 RN7SKP244-201ENST00000516513 307 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.36□□□□□ -1.87
GABPAQ06546 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GABPAQ06546 MTND4P33-201ENST00000556706 766 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.36□□□□□ -1.87
GABPAQ06546 AC012182.1-201ENST00000570133 895 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.36□□□□□ -1.87
GABPAQ06546 MIR4319-201ENST00000577285 85 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC091057.2-201ENST00000602594 792 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC006254.3-201ENST00000603353 884 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC009220.3-201ENST00000604318 586 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC055876.5-201ENST00000605667 259 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC080013.3-201ENST00000606839 578 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 AC004972.1-201ENST00000623934 2209 ntBASIC3.36□□□□□ -1.87
GABPAQ06546 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
GABPAQ06546 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GABPAQ06546 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.36□□□□□ -1.87
GABPAQ06546 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
GABPAQ06546 AC004925.1-201ENST00000624256 2706 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
GABPAQ06546 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GABPAQ06546 AL360182.1-201ENST00000397433 468 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 UBE2V1P2-201ENST00000397758 440 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 DHFRP6-201ENST00000401776 268 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AL049610.1-201ENST00000423374 372 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.35□□□□□ -1.87
GABPAQ06546 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.35□□□□□ -1.87
GABPAQ06546 NEK4P1-201ENST00000433383 879 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 VDAC1P3-201ENST00000434069 851 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 Z80107.1-201ENST00000436830 412 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 MTND4P6-201ENST00000438297 472 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 CR769776.1-201ENST00000441254 787 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 FGF7P5-201ENST00000441829 291 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 UQCRHP3-201ENST00000451503 251 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AL445669.2-201ENST00000454425 421 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.35□□□□□ -1.87
GABPAQ06546 MTCO3P11-201ENST00000455103 774 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.35□□□□□ -1.87
GABPAQ06546 AC108729.1-201ENST00000487812 947 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC090453.1-201ENST00000495560 436 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC114981.1-201ENST00000503897 678 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC020699.1-201ENST00000505161 445 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 HMGB1P22-201ENST00000505315 124 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC004062.1-201ENST00000509926 645 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 RPL23AP94-201ENST00000512518 302 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 RN7SKP43-201ENST00000516173 320 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 COX6CP8-201ENST00000522620 226 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC022861.1-201ENST00000522981 663 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 OR5AK1P-201ENST00000524837 922 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GABPAQ06546 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.35□□□□□ -1.87
GABPAQ06546 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.35□□□□□ -1.87
GABPAQ06546 NBEAP1-201ENST00000554452 979 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms