Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC006927.4-201ENST00000639187 543 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGCS2P54868 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGCS2P54868 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGCS2P54868 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS2P54868 AP001350.1-201ENST00000601906 1524 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS2P54868 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS2P54868 SNORD113-6-201ENST00000363345 75 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 XGY1-201ENST00000381172 446 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 Y_RNA.465-201ENST00000384293 102 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 MIR649-201ENST00000384843 97 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 RNA5SP21-201ENST00000410917 96 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AL008987.1-201ENST00000415528 237 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 MTCO2P21-201ENST00000419780 677 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 MTCO3P1-205ENST00000422088 832 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS2P54868 RPL21P66-201ENST00000426566 466 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 VDAC1P3-201ENST00000434069 851 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HMGCS2P54868 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS2P54868 AL034418.1-201ENST00000448675 860 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.24□□□□□ -1.89
HMGCS2P54868 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS2P54868 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGCS2P54868 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS2P54868 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGCS2P54868 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS2P54868 RN7SKP244-201ENST00000516513 307 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 RNU6-1261P-201ENST00000517194 104 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 ARL2BPP5-201ENST00000523141 481 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AP004371.1-201ENST00000525240 214 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AL389895.1-201ENST00000554127 252 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 NBEAP1-201ENST00000554452 979 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGCS2P54868 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS2P54868 AC090888.2-201ENST00000559765 1144 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AC107954.1-201ENST00000565906 727 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS2P54868 MIR3690-201ENST00000580266 75 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AL451074.6-201ENST00000608512 729 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AC021755.4-201ENST00000616620 456 ntBASIC3.24□□□□□ -1.89
HMGCS2P54868 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
HMGCS2P54868 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS2P54868 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS2P54868 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS2P54868 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS2P54868 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS2P54868 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS2P54868 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 U3.6-201ENST00000363622 211 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS2P54868 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS2P54868 RNU6-657P-201ENST00000383904 107 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 RNU6-1226P-201ENST00000384317 107 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS2P54868 AP000567.1-201ENST00000406413 156 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AL450338.1-201ENST00000407987 512 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 RNA5SP508-201ENST00000411327 119 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS2P54868 RPS7P13-201ENST00000413955 498 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC245054.2-201ENST00000415639 319 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC007390.1-201ENST00000415722 356 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGCS2P54868 ATP5F1P1-201ENST00000433775 569 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGCS2P54868 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS2P54868 AL662791.1-201ENST00000441992 928 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS2P54868 AC104090.1-201ENST00000506341 1171 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC021146.8-201ENST00000507455 733 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC006445.2-201ENST00000510061 472 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC116353.3-201ENST00000511215 249 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC026407.1-201ENST00000518369 204 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS2P54868 AC012182.1-201ENST00000570133 895 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS2P54868 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS2P54868 AC092954.1-201ENST00000609121 445 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC005332.6-201ENST00000613178 446 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 AC006111.3-201ENST00000622137 383 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS2P54868 AC092184.1-201ENST00000625042 715 ntBASIC3.23□□□□□ -1.89
HMGCS2P54868 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS2P54868 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
HMGCS2P54868 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC007256.1-201ENST00000392253 2765 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC093010.3-201ENST00000570269 15214 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS2P54868 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS2P54868 MT-TC-201ENST00000387405 66 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AL139095.1-201ENST00000404326 391 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC092447.3-201ENST00000426027 686 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 MYL8P-204ENST00000431574 518 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms