Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 PWAR6-201ENST00000552334 4618 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 DDX10P1-201ENST00000448545 1933 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NKX2-1P43699 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 MIR937-201ENST00000401271 86 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 AL391417.1-201ENST00000404100 426 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 RPS3AP24-201ENST00000407896 734 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 RPS3AP3-201ENST00000411933 242 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX2-1P43699 USP9YP13-201ENST00000417797 480 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AL159169.1-201ENST00000421119 127 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC009480.2-201ENST00000422916 432 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 PPP1R11P2-201ENST00000423543 382 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 RPL23AP38-201ENST00000423801 469 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 MTCO3P30-201ENST00000426425 670 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 DNAJC19P7-201ENST00000428811 344 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 USP9YP14-201ENST00000430663 563 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC024082.2-201ENST00000434771 238 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC009961.2-201ENST00000435771 251 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX2-1P43699 DNAJC19P4-201ENST00000440115 345 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AL049734.2-201ENST00000441066 616 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 PDSS1P2-201ENST00000449397 678 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX2-1P43699 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 SBDSP1-204ENST00000453858 737 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 RPS29P33-201ENST00000456717 146 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.17□□□□□ -1.9
NKX2-1P43699 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 RPL21P5-201ENST00000554662 472 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 MIR3682-201ENST00000581338 84 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 MIR548AB-201ENST00000584917 84 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC009977.1-201ENST00000586015 570 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX2-1P43699 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AP002826.1-201ENST00000608835 315 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC004908.2-201ENST00000609090 574 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 MIR6820-201ENST00000611508 62 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC091304.9-201ENST00000612091 226 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX2-1P43699 RNVU1-4-201ENST00000612985 164 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NKX2-1P43699 AC138932.5-201ENST00000617759 563 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 AC009159.1-201ENST00000618386 642 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NKX2-1P43699 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-1P43699 FARSBP1-201ENST00000435808 1778 ntBASIC3.17□□□□□ -1.9
NKX2-1P43699 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NKX2-1P43699 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-1P43699 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 AC092125.1-201ENST00000562568 1995 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 RNU5F-7P-201ENST00000363696 115 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 SNORA40.3-201ENST00000390964 122 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC078974.1-201ENST00000411597 223 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC011933.1-201ENST00000413334 321 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 RPL26P29-201ENST00000415623 438 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX2-1P43699 OR5BE1P-201ENST00000425977 939 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC010975.2-201ENST00000427781 588 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-1P43699 OR4K11P-201ENST00000431829 904 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 SNORA71B-202ENST00000439232 272 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms