Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL031176.1-201ENST00000604554 466 ntBASIC3.31□□□□□ -1.88
CHRNA3P32297 AL160281.1-201ENST00000605307 311 ntBASIC3.31□□□□□ -1.88
CHRNA3P32297 AC023158.2-201ENST00000614876 543 ntBASIC3.31□□□□□ -1.88
CHRNA3P32297 MIR8057-201ENST00000620957 69 ntBASIC3.31□□□□□ -1.88
CHRNA3P32297 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA3P32297 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA3P32297 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CHRNA3P32297 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.31□□□□□ -1.88
CHRNA3P32297 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA3P32297 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA3P32297 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA3P32297 TAB3P1-202ENST00000452645 1634 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA3P32297 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA3P32297 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA3P32297 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHRNA3P32297 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA3P32297 RNU6-882P-201ENST00000391025 103 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 SNORA11.2-201ENST00000408318 127 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 RNU2-42P-201ENST00000410697 113 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 RNU4-47P-201ENST00000410876 114 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA3P32297 AL356320.2-201ENST00000417263 507 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 MRPS36P1-201ENST00000421291 307 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 USP9YP36-201ENST00000424581 829 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 RPL7P44-201ENST00000424827 742 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA3P32297 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA3P32297 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 MTND2P20-201ENST00000440805 661 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 OR6K5P-201ENST00000447050 945 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC068587.2-201ENST00000478386 781 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA3P32297 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA3P32297 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA3P32297 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHRNA3P32297 MTCO2P15-201ENST00000532655 656 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA3P32297 HIGD1AP17-201ENST00000554576 276 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC055876.1-202ENST00000567053 138 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA3P32297 AC012493.2-201ENST00000595083 291 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC106900.2-201ENST00000604994 317 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 Z99289.3-201ENST00000605586 594 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC009237.15-201ENST00000610252 501 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC024257.5-201ENST00000612739 531 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC006386.1-201ENST00000619436 415 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 LINC02211-204ENST00000642024 1070 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 AC110774.1-201ENST00000623567 2018 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA3P32297 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
CHRNA3P32297 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA3P32297 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA3P32297 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
CHRNA3P32297 snoZ40.1-201ENST00000364540 72 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 Y_RNA.472-201ENST00000384322 102 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 MIR513B-201ENST00000385136 84 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 FAT1P1-201ENST00000406588 507 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA3P32297 AL353678.1-201ENST00000422735 741 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 RPL27AP8-201ENST00000424277 446 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 MTATP6P4-201ENST00000427725 675 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AL512649.1-201ENST00000428997 581 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.29□□□□□ -1.88
CHRNA3P32297 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA3P32297 NANOGP2-201ENST00000435391 727 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA3P32297 ELOCP23-201ENST00000452014 332 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AP001992.1-205ENST00000462248 379 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC108734.3-201ENST00000481241 1165 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA3P32297 AC090453.1-201ENST00000495560 436 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC114981.1-201ENST00000503897 678 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA3P32297 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 RN7SKP43-201ENST00000516173 320 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 SNORA31.5-201ENST00000516190 133 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.29□□□□□ -1.88
CHRNA3P32297 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA3P32297 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CHRNA3P32297 AC024224.1-201ENST00000538284 609 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA3P32297 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA3P32297 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA3P32297 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.29□□□□□ -1.88
CHRNA3P32297 MTND4P33-201ENST00000556706 766 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 MIR5004-201ENST00000579078 107 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 MIR2682-201ENST00000580305 110 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.29□□□□□ -1.88
CHRNA3P32297 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA3P32297 AC087683.2-201ENST00000611384 326 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 AC079395.3-201ENST00000615161 484 ntBASIC3.29□□□□□ -1.88
CHRNA3P32297 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms