Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.24□□□□□ -1.73
CD40P25942 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.24□□□□□ -1.73
CD40P25942 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.24□□□□□ -1.73
CD40P25942 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 AC233279.1-201ENST00000455300 423 ntBASIC4.24□□□□□ -1.73
CD40P25942 snoU13.24-201ENST00000458998 104 ntBASIC4.24□□□□□ -1.73
CD40P25942 RNU6-953P-201ENST00000459154 107 ntBASIC4.24□□□□□ -1.73
CD40P25942 RPS17P2-201ENST00000461663 408 ntBASIC4.24□□□□□ -1.73
CD40P25942 RPL21P93-201ENST00000480465 489 ntBASIC4.24□□□□□ -1.73
CD40P25942 ENPP7P11-201ENST00000505915 627 ntBASIC4.24□□□□□ -1.73
CD40P25942 SNORA31.3-201ENST00000516029 96 ntBASIC4.24□□□□□ -1.73
CD40P25942 Y_RNA.691-201ENST00000516611 103 ntBASIC4.24□□□□□ -1.73
CD40P25942 AF186190.1-201ENST00000517470 480 ntBASIC4.24□□□□□ -1.73
CD40P25942 IGKV2D-23-201ENST00000518179 286 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.24□□□□□ -1.73
CD40P25942 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.24□□□□□ -1.73
CD40P25942 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.24□□□□□ -1.73
CD40P25942 OR11H5P-201ENST00000554039 926 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC006349.1-201ENST00000555526 235 ntBASIC4.24□□□□□ -1.73
CD40P25942 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.24□□□□□ -1.73
CD40P25942 AC040958.1-201ENST00000561102 201 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.24□□□□□ -1.73
CD40P25942 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.24□□□□□ -1.73
CD40P25942 AL592436.1-201ENST00000605135 558 ntBASIC4.24□□□□□ -1.73
CD40P25942 Z82243.1-201ENST00000609432 473 ntBASIC4.24□□□□□ -1.73
CD40P25942 AL161616.1-201ENST00000611867 286 ntBASIC4.24□□□□□ -1.73
CD40P25942 AL442067.2-201ENST00000614033 363 ntBASIC4.24□□□□□ -1.73
CD40P25942 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.24□□□□□ -1.73
CD40P25942 AL360181.4-201ENST00000621752 134 ntBASIC4.24□□□□□ -1.73
CD40P25942 C2orf27A-204ENST00000623058 969 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC090574.1-201ENST00000623186 233 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC067931.1-201ENST00000624190 671 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CD40P25942 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CD40P25942 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 AP001350.1-201ENST00000601906 1524 ntBASIC4.24□□□□□ -1.73
CD40P25942 A2MP1-204ENST00000566278 4130 ntBASIC4.24□□□□□ -1.73
CD40P25942 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.24□□□□□ -1.73
CD40P25942 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.24□□□□□ -1.73
CD40P25942 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CD40P25942 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CD40P25942 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CD40P25942 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CD40P25942 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CD40P25942 RNU6-1252P-201ENST00000363054 104 ntBASIC4.23□□□□□ -1.73
CD40P25942 RNU6-1181P-201ENST00000384191 106 ntBASIC4.23□□□□□ -1.73
CD40P25942 RNA5SP219-201ENST00000390940 113 ntBASIC4.23□□□□□ -1.73
CD40P25942 SNORD70.1-201ENST00000391007 85 ntBASIC4.23□□□□□ -1.73
CD40P25942 RNU6-817P-201ENST00000391083 104 ntBASIC4.23□□□□□ -1.73
CD40P25942 FAT1P1-201ENST00000406588 507 ntBASIC4.23□□□□□ -1.73
CD40P25942 HSPE1P8-201ENST00000406997 288 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC114755.2-201ENST00000413520 361 ntBASIC4.23□□□□□ -1.73
CD40P25942 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 RPL7AP61-201ENST00000443410 636 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40P25942 RPS24P6-201ENST00000452670 400 ntBASIC4.23□□□□□ -1.73
CD40P25942 AL121877.1-201ENST00000453704 622 ntBASIC4.23□□□□□ -1.73
CD40P25942 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 IGLV2-34-201ENST00000490007 283 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40P25942 AP001086.1-201ENST00000494882 321 ntBASIC4.23□□□□□ -1.73
CD40P25942 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 SNORA19.2-201ENST00000516013 114 ntBASIC4.23□□□□□ -1.73
CD40P25942 RNU6-1153P-201ENST00000516760 105 ntBASIC4.23□□□□□ -1.73
CD40P25942 RNU6-273P-201ENST00000516937 96 ntBASIC4.23□□□□□ -1.73
CD40P25942 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 IGKV1-32-201ENST00000519290 311 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40P25942 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.23□□□□□ -1.73
CD40P25942 AP001880.2-201ENST00000538233 448 ntBASIC4.23□□□□□ -1.73
CD40P25942 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.23□□□□□ -1.73
CD40P25942 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.23□□□□□ -1.73
CD40P25942 AC012182.1-201ENST00000570133 895 ntBASIC4.23□□□□□ -1.73
CD40P25942 MIR3942-201ENST00000585264 109 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC010928.3-201ENST00000587712 541 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC005255.1-201ENST00000593748 216 ntBASIC4.23□□□□□ -1.73
CD40P25942 AP001330.4-201ENST00000604350 154 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40P25942 AL050343.2-201ENST00000607338 280 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC022893.3-201ENST00000607665 437 ntBASIC4.23□□□□□ -1.73
CD40P25942 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.23□□□□□ -1.73
CD40P25942 AC009570.1-201ENST00000609599 745 ntBASIC4.23□□□□□ -1.73
CD40P25942 MTND1P37-201ENST00000636562 264 ntBASIC4.23□□□□□ -1.73
CD40P25942 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40P25942 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40P25942 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms