Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.81□□□□□ -1.48
RFX1P22670 RPL26P6-201ENST00000440913 438 ntBASIC5.81□□□□□ -1.48
RFX1P22670 GAPDHP25-201ENST00000447061 1001 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC105399.1-202ENST00000447303 205 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.81□□□□□ -1.48
RFX1P22670 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.81□□□□□ -1.48
RFX1P22670 PGAM1P13-201ENST00000507497 754 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC116337.1-201ENST00000509680 687 ntBASIC5.81□□□□□ -1.48
RFX1P22670 GMPSP1-201ENST00000514075 579 ntBASIC5.81□□□□□ -1.48
RFX1P22670 RNU6-1016P-201ENST00000516689 94 ntBASIC5.81□□□□□ -1.48
RFX1P22670 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC087854.1-201ENST00000519706 414 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC100830.2-201ENST00000581636 240 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX1P22670 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 AC015967.1-201ENST00000619893 476 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AL078596.1-201ENST00000624856 447 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AL669831.3-213ENST00000636676 183 ntBASIC5.81□□□□□ -1.48
RFX1P22670 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX1P22670 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX1P22670 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
RFX1P22670 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RFX1P22670 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
RFX1P22670 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
RFX1P22670 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFX1P22670 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFX1P22670 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RFX1P22670 AC092376.2-201ENST00000622621 4116 ntBASIC5.8□□□□□ -1.48
RFX1P22670 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.8□□□□□ -1.48
RFX1P22670 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFX1P22670 Y_RNA.133-201ENST00000363428 110 ntBASIC5.8□□□□□ -1.48
RFX1P22670 RNU6-371P-201ENST00000364283 108 ntBASIC5.8□□□□□ -1.48
RFX1P22670 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFX1P22670 Y_RNA.480-201ENST00000384364 102 ntBASIC5.8□□□□□ -1.48
RFX1P22670 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFX1P22670 RNA5SP487-201ENST00000410186 122 ntBASIC5.8□□□□□ -1.48
RFX1P22670 Y_RNA.646-201ENST00000410980 101 ntBASIC5.8□□□□□ -1.48
RFX1P22670 RPS12P24-201ENST00000412619 387 ntBASIC5.8□□□□□ -1.48
RFX1P22670 AC113618.1-201ENST00000416747 285 ntBASIC5.8□□□□□ -1.48
RFX1P22670 AC093162.1-201ENST00000419682 124 ntBASIC5.8□□□□□ -1.48
RFX1P22670 SRSF1P1-201ENST00000424058 520 ntBASIC5.8□□□□□ -1.48
RFX1P22670 MTCO1P39-201ENST00000426148 480 ntBASIC5.8□□□□□ -1.48
RFX1P22670 HMGB1P27-201ENST00000431429 603 ntBASIC5.8□□□□□ -1.48
RFX1P22670 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.8□□□□□ -1.48
RFX1P22670 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.8□□□□□ -1.48
RFX1P22670 MTND5P22-201ENST00000458380 195 ntBASIC5.8□□□□□ -1.48
RFX1P22670 VN1R104P-201ENST00000505115 1009 ntBASIC5.8□□□□□ -1.48
RFX1P22670 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.8□□□□□ -1.48
RFX1P22670 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.8□□□□□ -1.48
RFX1P22670 AC106900.2-201ENST00000604994 317 ntBASIC5.8□□□□□ -1.48
RFX1P22670 ATP5A1P2-202ENST00000616464 443 ntBASIC5.8□□□□□ -1.48
RFX1P22670 AC011755.1-201ENST00000623763 2049 ntBASIC5.8□□□□□ -1.48
RFX1P22670 AC083837.1-201ENST00000565297 2994 ntBASIC5.8□□□□□ -1.48
RFX1P22670 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFX1P22670 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.8□□□□□ -1.48
RFX1P22670 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RFX1P22670 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.8□□□□□ -1.48
RFX1P22670 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RFX1P22670 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFX1P22670 Z73965.1-201ENST00000623412 2297 ntBASIC5.79□□□□□ -1.48
RFX1P22670 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.79□□□□□ -1.48
RFX1P22670 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFX1P22670 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RFX1P22670 AC006484.1-201ENST00000435086 1884 ntBASIC5.79□□□□□ -1.48
RFX1P22670 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RFX1P22670 AL034549.2-201ENST00000618285 3373 ntBASIC5.79□□□□□ -1.48
RFX1P22670 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFX1P22670 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.79□□□□□ -1.48
RFX1P22670 RNA5SP52-201ENST00000362448 134 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RNA5SP305-201ENST00000362665 119 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RNU6-1074P-201ENST00000383995 104 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RNU6-463P-201ENST00000384340 107 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RNA5SP187-201ENST00000384400 119 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RNU6-45P-201ENST00000384471 107 ntBASIC5.79□□□□□ -1.48
RFX1P22670 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.79□□□□□ -1.48
RFX1P22670 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
RFX1P22670 PRDX3P3-201ENST00000447765 522 ntBASIC5.79□□□□□ -1.48
RFX1P22670 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.79□□□□□ -1.48
RFX1P22670 AC104472.2-201ENST00000469035 601 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RPL23AP2-201ENST00000471227 466 ntBASIC5.79□□□□□ -1.48
RFX1P22670 AC117503.1-201ENST00000472241 394 ntBASIC5.79□□□□□ -1.48
RFX1P22670 SNRPCP3-201ENST00000474888 476 ntBASIC5.79□□□□□ -1.48
RFX1P22670 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.79□□□□□ -1.48
RFX1P22670 AC083982.1-201ENST00000485679 344 ntBASIC5.79□□□□□ -1.48
RFX1P22670 AC026801.1-201ENST00000497178 464 ntBASIC5.79□□□□□ -1.48
RFX1P22670 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.79□□□□□ -1.48
RFX1P22670 AC097473.1-201ENST00000508142 408 ntBASIC5.79□□□□□ -1.48
RFX1P22670 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.79□□□□□ -1.48
RFX1P22670 RNU6-927P-201ENST00000516199 100 ntBASIC5.79□□□□□ -1.48
RFX1P22670 RNU6-1213P-201ENST00000517075 94 ntBASIC5.79□□□□□ -1.48
RFX1P22670 Y_RNA.720-201ENST00000517166 92 ntBASIC5.79□□□□□ -1.48
RFX1P22670 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.79□□□□□ -1.48
RFX1P22670 AC040958.1-201ENST00000561102 201 ntBASIC5.79□□□□□ -1.48
RFX1P22670 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.79□□□□□ -1.48
RFX1P22670 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.79□□□□□ -1.48
RFX1P22670 MIR6839-201ENST00000620425 113 ntBASIC5.79□□□□□ -1.48
RFX1P22670 AP002799.1-201ENST00000623552 423 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms