Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ERCC3P19447 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 AC004972.1-201ENST00000623934 2209 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC3P19447 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 AC126323.6-202ENST00000568092 3511 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
ERCC3P19447 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
ERCC3P19447 Y_RNA.373-201ENST00000365600 103 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 RNU6-116P-201ENST00000384042 109 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 MIR129-1-201ENST00000384972 72 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 SOD2P1-201ENST00000396543 562 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC097374.1-203ENST00000400783 485 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 SNORA11-201ENST00000408789 128 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.52□□□□□ -1.53
ERCC3P19447 TOMM22P1-201ENST00000418578 312 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AL645608.4-201ENST00000423619 154 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 MTCO1P39-201ENST00000426148 480 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.52□□□□□ -1.53
ERCC3P19447 FTH1P6-201ENST00000430768 320 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC3P19447 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 AL049874.1-201ENST00000489560 388 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC3P19447 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC3P19447 RBBP4P6-201ENST00000508098 202 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC091868.1-201ENST00000508746 304 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC3P19447 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC3P19447 SNORA31.22-201ENST00000517204 135 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.52□□□□□ -1.53
ERCC3P19447 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.52□□□□□ -1.53
ERCC3P19447 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC3P19447 MIR5699-201ENST00000578903 90 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC3P19447 AP001330.4-201ENST00000604350 154 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AL121932.1-201ENST00000605542 214 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC007390.2-201ENST00000606229 3803 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 AC007998.5-201ENST00000622938 237 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 AC090617.10-201ENST00000624308 134 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ERCC3P19447 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC3P19447 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC3P19447 PNPT1P2-201ENST00000456768 2050 ntBASIC5.52□□□□□ -1.53
ERCC3P19447 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
ERCC3P19447 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC3P19447 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC3P19447 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC3P19447 AL022322.2-201ENST00000624072 20397 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC3P19447 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC3P19447 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC3P19447 RN7SKP44-201ENST00000363602 316 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 RNU6-288P-201ENST00000363690 104 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 Y_RNA.231-201ENST00000364358 102 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 HSPE1P8-201ENST00000406997 288 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 Y_RNA.615-201ENST00000410769 117 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 RNU6-193P-201ENST00000410977 107 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AC245054.1-201ENST00000420944 258 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 MTATP6P4-201ENST00000427725 675 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 ERLEC1P1-201ENST00000433806 578 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 RPL26P6-201ENST00000440913 438 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC3P19447 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC3P19447 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC3P19447 HMGB3P30-201ENST00000457863 606 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AP000926.1-201ENST00000479573 241 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC3P19447 AC108860.1-201ENST00000484521 383 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC3P19447 RNU6-123P-201ENST00000516163 102 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 RNU6-1038P-201ENST00000516516 104 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AP005435.4-201ENST00000529514 284 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC3P19447 SNRPGP16-201ENST00000533275 226 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AC006349.1-201ENST00000555526 235 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC3P19447 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
ERCC3P19447 uc_338.11-201ENST00000619132 160 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 MTND4P35-201ENST00000604257 1375 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 AL442639.1-201ENST00000625030 1899 ntBASIC5.51□□□□□ -1.53
ERCC3P19447 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC3P19447 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC3P19447 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC3P19447 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC3P19447 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC3P19447 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC3P19447 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC3P19447 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC3P19447 RNU4-26P-201ENST00000410270 107 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 ELOCP19-201ENST00000411919 318 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.5□□□□□ -1.53
ERCC3P19447 RPEP3-201ENST00000425462 676 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AL732292.1-201ENST00000426692 226 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms